Information for 16-SGGTTCGA (Motif 11)


Reverse Opposite:

p-value:1e-27
log p-value:-6.303e+01
Information Content per bp:1.716
Number of Target Sequences with motif1297.0
Percentage of Target Sequences with motif29.53%
Number of Background Sequences with motif4228.9
Percentage of Background Sequences with motif22.42%
Average Position of motif in Targets466.6 +/- 392.4bp
Average Position of motif in Background307.5 +/- 242.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.28
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

OPI1/Literature(Harbison)/Yeast

Match Rank:1
Score:0.87
Offset:1
Orientation:reverse strand
Alignment:SGGTTCGA
-GATTCGA

OPI1(MacIsaac)/Yeast

Match Rank:2
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:SGGTTCGA
CGGTTCG-

XBP1/MA0414.1/Jaspar

Match Rank:3
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:SGGTTCGA-
--NCTCGAG

OPI1/MA0349.1/Jaspar

Match Rank:4
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:SGGTTCGA
CGGTTCG-

STB4/STB4_YPD/[](Harbison)/Yeast

Match Rank:5
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-SGGTTCGA
TCGGNNCGA

STB4(MacIsaac)/Yeast

Match Rank:6
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-SGGTTCGA
TCGGNNCGA

YER051W(MacIsaac)/Yeast

Match Rank:7
Score:0.70
Offset:3
Orientation:forward strand
Alignment:SGGTTCGA-
---TTCGAA

SMZ/MA0553.1/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:SGGTTCGA--
--GTACGAGG

SNF1(MacIsaac)/Yeast

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--SGGTTCGA-------
CCGGGTTCGATCCCCGG

XBP1(MacIsaac)/Yeast

Match Rank:10
Score:0.63
Offset:3
Orientation:forward strand
Alignment:SGGTTCGA---
---CTCGAGGA