Information for 8-CACGTGAY (Motif 5)


Reverse Opposite:

p-value:1e-46
log p-value:-1.079e+02
Information Content per bp:1.887
Number of Target Sequences with motif440.0
Percentage of Target Sequences with motif10.02%
Number of Background Sequences with motif892.8
Percentage of Background Sequences with motif4.73%
Average Position of motif in Targets417.5 +/- 319.7bp
Average Position of motif in Background302.7 +/- 261.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TYE7(MacIsaac)/Yeast

Match Rank:1
Score:1.00
Offset:0
Orientation:reverse strand
Alignment:CACGTGAY
CACGTGAC

Arntl/MA0603.1/Jaspar

Match Rank:2
Score:0.99
Offset:-1
Orientation:reverse strand
Alignment:-CACGTGAY-
NCACGTGACN

TYE7/MA0409.1/Jaspar

Match Rank:3
Score:0.98
Offset:0
Orientation:forward strand
Alignment:CACGTGAY
CACGTGA-

CBF1/CBF1_SM/72-CBF1(Harbison)/Yeast

Match Rank:4
Score:0.98
Offset:0
Orientation:reverse strand
Alignment:CACGTGAY
CACGTGA-

CBF1(MacIsaac)/Yeast

Match Rank:5
Score:0.98
Offset:0
Orientation:reverse strand
Alignment:CACGTGAY
CACGTGAC

Cbf1(bHLH)/Yeast-Cbf1-ChIP-Seq(GSE29506)/Homer

Match Rank:6
Score:0.98
Offset:-1
Orientation:forward strand
Alignment:-CACGTGAY-
TCACGTGAYH

CBF1/MA0281.1/Jaspar

Match Rank:7
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-CACGTGAY
GCACGTGA-

TFE3/MA0831.1/Jaspar

Match Rank:8
Score:0.96
Offset:-2
Orientation:forward strand
Alignment:--CACGTGAY
ATCACGTGAC

TFEB/MA0692.1/Jaspar

Match Rank:9
Score:0.96
Offset:-2
Orientation:forward strand
Alignment:--CACGTGAY
ATCACGTGAC

SPCH(bHLH)/Seedling-SPCH-ChIP-Seq(GSE57497)/Homer

Match Rank:10
Score:0.96
Offset:-3
Orientation:forward strand
Alignment:---CACGTGAY
WNBCACGTGA-