Information for 10-CGGCCGGC (Motif 6)


Reverse Opposite:

p-value:1e-30
log p-value:-6.997e+01
Information Content per bp:1.762
Number of Target Sequences with motif496.0
Percentage of Target Sequences with motif11.29%
Number of Background Sequences with motif1238.0
Percentage of Background Sequences with motif6.56%
Average Position of motif in Targets499.4 +/- 354.1bp
Average Position of motif in Background324.3 +/- 276.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ERF6/MA1006.1/Jaspar

Match Rank:1
Score:0.86
Offset:0
Orientation:forward strand
Alignment:CGGCCGGC--
CTGCCGGCGT

YLL054C/MA0429.1/Jaspar

Match Rank:2
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-CGGCCGGC
TCGGCCG--

RDS1(MacIsaac)/Yeast

Match Rank:3
Score:0.86
Offset:0
Orientation:forward strand
Alignment:CGGCCGGC
CGGCCG--

RDS1/MA0361.1/Jaspar

Match Rank:4
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-CGGCCGGC
NCGGCCG--

ERF105/MA1000.1/Jaspar

Match Rank:5
Score:0.83
Offset:1
Orientation:forward strand
Alignment:CGGCCGGC-
-TGCCGGCG

ERF098/MA0999.1/Jaspar

Match Rank:6
Score:0.81
Offset:0
Orientation:forward strand
Alignment:CGGCCGGC
CCGCCGCC

ERF13/MA1004.1/Jaspar

Match Rank:7
Score:0.80
Offset:1
Orientation:forward strand
Alignment:CGGCCGGC-
-CGCCGCCA

ERF4/MA0992.1/Jaspar

Match Rank:8
Score:0.80
Offset:0
Orientation:forward strand
Alignment:CGGCCGGC
CCGCCGCC

ERF112/MA1002.1/Jaspar

Match Rank:9
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-CGGCCGGC-
GCCGCCGCCA

ERF096/MA0998.1/Jaspar

Match Rank:10
Score:0.79
Offset:0
Orientation:forward strand
Alignment:CGGCCGGC--
CCGCCGCCAT