Homer de novo Motif Results (/srv/scratch/training_camp/tc2016/user23/analysis/motifs/Cz_300_S1_R1.trimmed.nodup_peaks.narrowPeak/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 4259
Total background sequences = 21027
* - possible false positive

Rank	Motif	P-value	log P-pvalue	% of Targets	% of Background	STD(Bg STD)	Best Match/Details	Motif File
1		1e-204	-4.709e+02	25.52%	9.36%	306.6bp (213.2bp)	REB1(MacIsaac)/Yeast(0.993) More Information \| Similar Motifs Found	motif file (matrix)
2		1e-102	-2.355e+02	39.37%	24.42%	336.3bp (197.3bp)	PB0192.1_Tcfap2e_2/Jaspar(0.921) More Information \| Similar Motifs Found	motif file (matrix)
3		1e-93	-2.146e+02	21.10%	10.35%	321.6bp (247.4bp)	RSC30/MA0375.1/Jaspar(0.940) More Information \| Similar Motifs Found	motif file (matrix)
4		1e-46	-1.071e+02	10.77%	5.20%	280.8bp (199.9bp)	TYE7(MacIsaac)/Yeast(0.995) More Information \| Similar Motifs Found	motif file (matrix)
5		1e-45	-1.047e+02	36.74%	26.76%	335.3bp (204.5bp)	TATA-box/SacCer-Promoters/Homer(0.883) More Information \| Similar Motifs Found	motif file (matrix)
6		1e-32	-7.448e+01	8.90%	4.60%	340.7bp (253.8bp)	SeqBias: CA-repeat(0.872) More Information \| Similar Motifs Found	motif file (matrix)
7		1e-31	-7.247e+01	30.00%	22.23%	327.3bp (225.1bp)	SKN7(MacIsaac)/Yeast(0.882) More Information \| Similar Motifs Found	motif file (matrix)
8		1e-31	-7.148e+01	7.63%	3.77%	329.8bp (222.0bp)	IME1/MA0320.1/Jaspar(0.779) More Information \| Similar Motifs Found	motif file (matrix)
9		1e-30	-7.134e+01	17.32%	11.28%	347.7bp (200.8bp)	DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer(0.655) More Information \| Similar Motifs Found	motif file (matrix)
10		1e-25	-5.896e+01	9.84%	5.72%	335.2bp (189.4bp)	CHA4(MacIsaac)/Yeast(0.869) More Information \| Similar Motifs Found	motif file (matrix)
11		1e-24	-5.532e+01	3.36%	1.25%	302.6bp (247.1bp)	FHL1(MacIsaac)/Yeast(0.771) More Information \| Similar Motifs Found	motif file (matrix)
12		1e-17	-3.924e+01	22.86%	17.71%	306.5bp (174.1bp)	SFP1/SacCer-Promoters/Homer(0.843) More Information \| Similar Motifs Found	motif file (matrix)
13		1e-14	-3.386e+01	3.57%	1.76%	251.7bp (188.0bp)	RPH1/Literature(Harbison)/Yeast(0.735) More Information \| Similar Motifs Found	motif file (matrix)
14		1e-13	-3.193e+01	21.95%	17.38%	299.2bp (195.0bp)	IME1/MA0320.1/Jaspar(0.672) More Information \| Similar Motifs Found	motif file (matrix)
15		1e-12	-2.877e+01	4.77%	2.77%	341.4bp (185.6bp)	RPN4/RPN4_H2O2Lo/[](Harbison)/Yeast(0.941) More Information \| Similar Motifs Found	motif file (matrix)