Information for 13-GCTCGCTT (Motif 9)


Reverse Opposite:

p-value:1e-30
log p-value:-7.134e+01
Information Content per bp:1.783
Number of Target Sequences with motif738.0
Percentage of Target Sequences with motif17.32%
Number of Background Sequences with motif2371.3
Percentage of Background Sequences with motif11.28%
Average Position of motif in Targets459.6 +/- 347.7bp
Average Position of motif in Background281.1 +/- 200.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GCTCGCTT
GCGCGCTA

UPC2/MA0411.1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GCTCGCTT-
--TCGTATA

PB0139.1_Irf5_2/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GCTCGCTT--
NNAATTCTCGNTNAN

che-1/MA0260.1/Jaspar

Match Rank:4
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GCTCGCTT-
---GGTTTC

MA0260.1_che-1/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GCTCGCTT-
---GGTTTC

Unknown3/Arabidopsis-Promoters/Homer

Match Rank:6
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GCTCGCTT----
--CCGGTTTART

Dof3/MA0021.1/Jaspar

Match Rank:7
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GCTCGCTT-
---CGCTTT

BARHL2/MA0635.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCTCGCTT---
-ANCGTTTANN

PB0008.1_E2F2_1/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GCTCGCTT----
NTCGCGCGCCTTNNN

DOF2(C2C2(Zn) Dof)/Zea mays/AthaMap

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCTCGCTT-----
--NNGCTTTANNN