Information for 22-GAAAAWTT (Motif 12)


Reverse Opposite:

p-value:1e-17
log p-value:-3.924e+01
Information Content per bp:1.946
Number of Target Sequences with motif974.0
Percentage of Target Sequences with motif22.86%
Number of Background Sequences with motif3722.5
Percentage of Background Sequences with motif17.71%
Average Position of motif in Targets335.6 +/- 306.5bp
Average Position of motif in Background279.4 +/- 174.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SFP1/SacCer-Promoters/Homer

Match Rank:1
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:GAAAAWTT----
RAAAATTTTTHH

cad/dmmpmm(Down)/fly

Match Rank:2
Score:0.82
Offset:1
Orientation:forward strand
Alignment:GAAAAWTT-
-AAAAATTT

SFP1/MA0378.1/Jaspar

Match Rank:3
Score:0.79
Offset:-5
Orientation:reverse strand
Alignment:-----GAAAAWTT--------
CNGNAGAAAATTTTTTNNNNT

STB3/MA0390.1/Jaspar

Match Rank:4
Score:0.78
Offset:-7
Orientation:reverse strand
Alignment:-------GAAAAWTT------
NNNNAGTGAAAAATTTTNGAC

SUM1/MA0398.1/Jaspar

Match Rank:5
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GAAAAWTT--
-AAAAATTTT

EDS1/MA0294.1/Jaspar

Match Rank:6
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GAAAAWTT
CGGAAAAAT-

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GAAAAWTT
TGGAAAA---

NFAT5/MA0606.1/Jaspar

Match Rank:8
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----GAAAAWTT
NATGGAAAAN--

NFATC3/MA0625.1/Jaspar

Match Rank:9
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----GAAAAWTT
AATGGAAAAT--

dl/dmmpmm(Bigfoot)/fly

Match Rank:10
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GAAAAWTT-
GGGGAAAATCC