Information for 24-TARGCRGT (Motif 14)


Reverse Opposite:

p-value:1e-13
log p-value:-3.193e+01
Information Content per bp:1.577
Number of Target Sequences with motif935.0
Percentage of Target Sequences with motif21.95%
Number of Background Sequences with motif3653.4
Percentage of Background Sequences with motif17.38%
Average Position of motif in Targets387.4 +/- 299.2bp
Average Position of motif in Background278.1 +/- 195.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

IME1/MA0320.1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TARGCRGT
CTCGGCGG-

IME1(MacIsaac)/Yeast

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TARGCRGT
CTCGGCGG-

PDR3/Literature(Harbison)/Yeast

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TARGCRGT
TCCGCGGA

PDR3/MA0353.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TARGCRGT
TCCGCGGA

PDR3(MacIsaac)/Yeast

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TARGCRGT
TCCGCGGA

NRL/MA0842.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TARGCRGT--
GTCAGCANNTN

BARHL2/MA0635.1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TARGCRGT
GCTAAACGGT

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TARGCRGT--
--GGCVGTTR

OTX1/MA0711.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TARGCRGT
TTAATCCG-

bcd/dmmpmm(Pollard)/fly

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TARGCRGT
CTAATCCG-