Information for 11-CGGCCCGG (Motif 7)


Reverse Opposite:

p-value:1e-31
log p-value:-7.247e+01
Information Content per bp:1.587
Number of Target Sequences with motif1278.0
Percentage of Target Sequences with motif30.00%
Number of Background Sequences with motif4672.2
Percentage of Background Sequences with motif22.23%
Average Position of motif in Targets441.4 +/- 327.3bp
Average Position of motif in Background280.3 +/- 225.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.41
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SKN7(MacIsaac)/Yeast

Match Rank:1
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:CGGCCCGG-
-GGCCCGGA

SKN7/MA0381.1/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CGGCCCGG
NTGGCC---

RDS1/MA0361.1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CGGCCCGG
CGGCCGA-

SKN7/SKN7_H2O2Lo/[](Harbison)/Yeast

Match Rank:4
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CGGCCCGG--
-GGCCCNGGC

SUT1/SUT1_YPD/[](Harbison)/Yeast

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CGGCCCGG-
CCGGCCCCGC

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CGGCCCGG
AGGCCTAG

RDS1(MacIsaac)/Yeast

Match Rank:7
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CGGCCCGG
CGGCCG--

CAT8/MA0280.1/Jaspar

Match Rank:8
Score:0.67
Offset:4
Orientation:forward strand
Alignment:CGGCCCGG--
----CCGGAA

PUT3/MA0358.1/Jaspar

Match Rank:9
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CGGCCCGG-
-TTCCCGGG

YDR026C(MacIsaac)/Yeast

Match Rank:10
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CGGCCCGG
--ACCCGG