Information for 16-ATGCACGG (Motif 11)


Reverse Opposite:

p-value:1e-24
log p-value:-5.532e+01
Information Content per bp:1.908
Number of Target Sequences with motif143.0
Percentage of Target Sequences with motif3.36%
Number of Background Sequences with motif263.3
Percentage of Background Sequences with motif1.25%
Average Position of motif in Targets395.9 +/- 302.6bp
Average Position of motif in Background285.6 +/- 247.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

FHL1(MacIsaac)/Yeast

Match Rank:1
Score:0.77
Offset:0
Orientation:forward strand
Alignment:ATGCACGG--
ATGTACGGAT

FHL1/FHL1_YPD/47-RAP1(Harbison)/Yeast

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:ATGCACGG---
ATGTACGGGTG

PHD1/MA0355.1/Jaspar

Match Rank:3
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--ATGCACGG
NGNTGCAGGN

SFP1/SFP1_SM/50-RAP1(Harbison)/Yeast

Match Rank:4
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:ATGCACGG--
ATGTACGGGT

SFP1(MacIsaac)/Yeast

Match Rank:5
Score:0.71
Offset:0
Orientation:forward strand
Alignment:ATGCACGG--
ATGTACGGGT

SOK2/MA0385.1/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--ATGCACGG-
ACCTGCAGGCA

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ATGCACGG-
ATGCCCACC

RAP1/RAP1_YPD/85-RAP1(Harbison)/Yeast

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ATGCACGG---
-TGTACGGGTG

LEC2/MA0581.1/Jaspar

Match Rank:9
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---ATGCACGG
TGCATGCACAT

SPL14(SBP)/Arabidopsis thaliana/AthaMap

Match Rank:10
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----ATGCACGG------
CCCTNCTGTACGGACGNNA