Information for 12-TSGCSSAG (Motif 8)


Reverse Opposite:

p-value:1e-31
log p-value:-7.148e+01
Information Content per bp:1.765
Number of Target Sequences with motif325.0
Percentage of Target Sequences with motif7.63%
Number of Background Sequences with motif791.8
Percentage of Background Sequences with motif3.77%
Average Position of motif in Targets396.3 +/- 329.8bp
Average Position of motif in Background281.5 +/- 222.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

IME1/MA0320.1/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:forward strand
Alignment:TSGCSSAG
CCGCCGAG

IME1(MacIsaac)/Yeast

Match Rank:2
Score:0.77
Offset:0
Orientation:forward strand
Alignment:TSGCSSAG
CCGCCGAG

CHA4/MA0283.1/Jaspar

Match Rank:3
Score:0.75
Offset:1
Orientation:forward strand
Alignment:TSGCSSAG-
-GGCGGAGA

SUT1/MA0399.1/Jaspar

Match Rank:4
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TSGCSSAG
-CGCGGGG

dpy-27/MA0540.1/Jaspar

Match Rank:5
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TSGCSSAG-----
TTATCGCGCAGGGANA

SUT1(MacIsaac)/Yeast

Match Rank:6
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TSGCSSAG
-CGCGGGG

RIM101/MA0368.1/Jaspar

Match Rank:7
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TSGCSSAG
-CGCCAAG

CDC5(MYB)/Arabidopsis thaliana/AthaMap

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TSGCSSAG--
CGCGCTGAGCN

CDC5/MA0579.1/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TSGCSSAG--
CGCGCTGAGCN

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TSGCSSAG---
-TGCCCAGNHW