Information for 3-CGCGCGGV (Motif 3)


Reverse Opposite:

p-value:1e-93
log p-value:-2.146e+02
Information Content per bp:1.656
Number of Target Sequences with motif899.0
Percentage of Target Sequences with motif21.10%
Number of Background Sequences with motif2176.2
Percentage of Background Sequences with motif10.35%
Average Position of motif in Targets432.0 +/- 321.6bp
Average Position of motif in Background272.5 +/- 247.4bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.39
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RSC30/MA0375.1/Jaspar

Match Rank:1
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:CGCGCGGV
CGCGCGCG

RSC3/MA0374.1/Jaspar

Match Rank:2
Score:0.91
Offset:0
Orientation:forward strand
Alignment:CGCGCGGV
CGCGCGG-

Tcfl5/MA0632.1/Jaspar

Match Rank:3
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--CGCGCGGV
GGCACGTGCC

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:4
Score:0.80
Offset:-3
Orientation:forward strand
Alignment:---CGCGCGGV
TAGCGCGC---

SUT1(MacIsaac)/Yeast

Match Rank:5
Score:0.78
Offset:0
Orientation:forward strand
Alignment:CGCGCGGV
CGCGGGG-

SUT1/MA0399.1/Jaspar

Match Rank:6
Score:0.77
Offset:0
Orientation:forward strand
Alignment:CGCGCGGV
CGCGGGG-

MBP1/MA0329.1/Jaspar

Match Rank:7
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--CGCGCGGV
NNCGCGT---

SeqBias: CG-repeat

Match Rank:8
Score:0.77
Offset:0
Orientation:forward strand
Alignment:CGCGCGGV--
CGCGCGCGCG

PB0095.1_Zfp161_1/Jaspar

Match Rank:9
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---CGCGCGGV-----
TGGCGCGCGCGCCTGA

PB0008.1_E2F2_1/Jaspar

Match Rank:10
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--CGCGCGGV-----
NTCGCGCGCCTTNNN