Homer de novo Motif Results (/srv/scratch/training_camp/tc2016/user23/analysis/motifs/DMSO_1_S6_R1.trimmed.nodup_peaks.narrowPeak/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 4576
Total background sequences = 20991
* - possible false positive

Rank	Motif	P-value	log P-pvalue	% of Targets	% of Background	STD(Bg STD)	Best Match/Details	Motif File
1		1e-199	-4.593e+02	23.82%	8.83%	282.9bp (220.6bp)	REB1(MacIsaac)/Yeast(0.994) More Information \| Similar Motifs Found	motif file (matrix)
2		1e-100	-2.323e+02	39.42%	25.03%	341.8bp (199.6bp)	PB0192.1_Tcfap2e_2/Jaspar(0.883) More Information \| Similar Motifs Found	motif file (matrix)
3		1e-75	-1.727e+02	36.56%	24.35%	320.4bp (234.3bp)	RSC3/MA0374.1/Jaspar(0.911) More Information \| Similar Motifs Found	motif file (matrix)
4		1e-55	-1.288e+02	30.27%	20.36%	333.0bp (218.0bp)	IME1/MA0320.1/Jaspar(0.916) More Information \| Similar Motifs Found	motif file (matrix)
5		1e-49	-1.129e+02	40.47%	30.16%	356.5bp (206.3bp)	TATA-box/SacCer-Promoters/Homer(0.889) More Information \| Similar Motifs Found	motif file (matrix)
6		1e-46	-1.065e+02	5.81%	2.11%	312.8bp (233.3bp)	TYE7(MacIsaac)/Yeast(0.997) More Information \| Similar Motifs Found	motif file (matrix)
7		1e-40	-9.401e+01	15.78%	9.46%	304.5bp (200.8bp)	FHL1(MacIsaac)/Yeast(0.783) More Information \| Similar Motifs Found	motif file (matrix)
8		1e-28	-6.502e+01	4.83%	2.08%	295.8bp (196.1bp)	OPI1/Literature(Harbison)/Yeast(0.921) More Information \| Similar Motifs Found	motif file (matrix)
9		1e-26	-6.076e+01	10.07%	5.97%	313.4bp (197.8bp)	RAP1/MA0359.1/Jaspar(0.879) More Information \| Similar Motifs Found	motif file (matrix)
10		1e-25	-5.779e+01	21.42%	15.56%	350.3bp (237.4bp)	Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer(0.971) More Information \| Similar Motifs Found	motif file (matrix)
11		1e-22	-5.151e+01	7.12%	3.98%	306.0bp (181.1bp)	CHA4(MacIsaac)/Yeast(0.889) More Information \| Similar Motifs Found	motif file (matrix)
12		1e-17	-4.004e+01	29.04%	23.51%	368.7bp (200.6bp)	MSN4(MacIsaac)/Yeast(0.802) More Information \| Similar Motifs Found	motif file (matrix)
13		1e-16	-3.911e+01	8.02%	5.05%	336.8bp (194.6bp)	GAGA-repeat/Arabidopsis-Promoters/Homer(0.859) More Information \| Similar Motifs Found	motif file (matrix)
14		1e-13	-3.194e+01	4.55%	2.57%	295.3bp (183.6bp)	RPN4/RPN4_H2O2Lo/[](Harbison)/Yeast(0.941) More Information \| Similar Motifs Found	motif file (matrix)
15		1e-13	-3.129e+01	4.70%	2.71%	285.7bp (206.5bp)	MET31(MacIsaac)/Yeast(0.758) More Information \| Similar Motifs Found	motif file (matrix)
16 *		1e-10	-2.372e+01	34.75%	30.29%	330.8bp (193.2bp)	MATA1(MacIsaac)/Yeast(0.659) More Information \| Similar Motifs Found	motif file (matrix)