Information for 25-GTATAGTG (Motif 16)


Reverse Opposite:

p-value:1e-10
log p-value:-2.372e+01
Information Content per bp:1.606
Number of Target Sequences with motif1590.0
Percentage of Target Sequences with motif34.75%
Number of Background Sequences with motif6355.6
Percentage of Background Sequences with motif30.29%
Average Position of motif in Targets394.0 +/- 330.8bp
Average Position of motif in Background280.6 +/- 193.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.34
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MATA1(MacIsaac)/Yeast

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GTATAGTG-
--ATTGTGC

HMRA1/MA0327.1/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GTATAGTG-
--ATTGTGC

Cf2-II/dmmpmm(Pollard)/fly

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GTATAGTG
GAGTATAA--

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GTATAGTG--
BTBRAGTGSN

BEAF-32B/dmmpmm(Pollard)/fly

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GTATAGTG
AATATCGC-

PB0128.1_Gcm1_2/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GTATAGTG------
TGCGCATAGGGGAGGAG

Unknown2/Drosophila-Promoters/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GTATAGTG---
---TAGKGATG

br-Z2/dmmpmm(Bigfoot)/fly

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTATAGTG
TAAATAG--

YER130C/MA0423.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GTATAGTG--
-NATAGGGGN

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GTATAGTG---
-TTGAGTGSTT