Information for 8-TGCACGGA (Motif 7)


Reverse Opposite:

p-value:1e-40
log p-value:-9.401e+01
Information Content per bp:1.830
Number of Target Sequences with motif722.0
Percentage of Target Sequences with motif15.78%
Number of Background Sequences with motif1985.0
Percentage of Background Sequences with motif9.46%
Average Position of motif in Targets430.7 +/- 304.5bp
Average Position of motif in Background277.2 +/- 200.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

FHL1(MacIsaac)/Yeast

Match Rank:1
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-TGCACGGA-
ATGTACGGAT

SPL14(SBP)/Arabidopsis thaliana/AthaMap

Match Rank:2
Score:0.78
Offset:-6
Orientation:reverse strand
Alignment:------TGCACGGA-----
CCCTNCTGTACGGACGNNA

SPL14/MA0586.1/Jaspar

Match Rank:3
Score:0.78
Offset:-6
Orientation:reverse strand
Alignment:------TGCACGGA-----
CCCTNCTGTACGGACGNNA

FHL1/FHL1_YPD/47-RAP1(Harbison)/Yeast

Match Rank:4
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TGCACGGA--
ATGTACGGGTG

SFP1/SFP1_SM/50-RAP1(Harbison)/Yeast

Match Rank:5
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TGCACGGA-
ATGTACGGGT

SFP1(MacIsaac)/Yeast

Match Rank:6
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TGCACGGA-
ATGTACGGGT

SPL11/MA1056.1/Jaspar

Match Rank:7
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---TGCACGGA-
TATCGTACGGAT

YKL222C/MA0428.1/Jaspar

Match Rank:8
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TGCACGGA---
--AACGGAAAT

SPL5/MA1059.1/Jaspar

Match Rank:9
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TGCACGGA
TTGTACGGC

SPL12/MA1057.1/Jaspar

Match Rank:10
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TGCACGGA
TGTACGGT