Information for 17-KBCCCTTY (Motif 12)


Reverse Opposite:

p-value:1e-17
log p-value:-4.004e+01
Information Content per bp:1.780
Number of Target Sequences with motif1329.0
Percentage of Target Sequences with motif29.04%
Number of Background Sequences with motif4933.7
Percentage of Background Sequences with motif23.51%
Average Position of motif in Targets437.3 +/- 368.7bp
Average Position of motif in Background288.9 +/- 200.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.30
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MSN4(MacIsaac)/Yeast

Match Rank:1
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:KBCCCTTY
CCCCCTT-

NDD1(MacIsaac)/Yeast

Match Rank:2
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--KBCCCTTY
TTTCCCCTTT

MSN2(MacIsaac)/Yeast

Match Rank:3
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:KBCCCTTY
GCCCCTT-

MSN4/Literature(Harbison)/Yeast

Match Rank:4
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:KBCCCTTY
NCCCCTG-

RGM1/MA0366.1/Jaspar

Match Rank:5
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:KBCCCTTY
-CCCCT--

DOF5.7/MA0984.1/Jaspar

Match Rank:6
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:KBCCCTTY-
-CCTCTTTT

Dof3/MA0021.1/Jaspar

Match Rank:7
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:KBCCCTTY
--CGCTTT

CDF3/MA0974.1/Jaspar

Match Rank:8
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:KBCCCTTY--
-NCACTTTTT

MSN4/MA0342.1/Jaspar

Match Rank:9
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:KBCCCTTY
-CCCCT--

MSN2/MSN2_H2O2Hi/1-MSN2(Harbison)/Yeast

Match Rank:10
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--KBCCCTTY
CCGCCCCTT-