Information for 5-CTCSGCGG (Motif 4)


Reverse Opposite:

p-value:1e-55
log p-value:-1.288e+02
Information Content per bp:1.542
Number of Target Sequences with motif1385.0
Percentage of Target Sequences with motif30.27%
Number of Background Sequences with motif4271.7
Percentage of Background Sequences with motif20.36%
Average Position of motif in Targets426.1 +/- 333.0bp
Average Position of motif in Background281.1 +/- 218.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.28
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

IME1/MA0320.1/Jaspar

Match Rank:1
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:CTCSGCGG
CTCGGCGG

IME1(MacIsaac)/Yeast

Match Rank:2
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:CTCSGCGG
CTCGGCGG

SUT1/MA0399.1/Jaspar

Match Rank:3
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:CTCSGCGG
CCCCGCG-

SUT1(MacIsaac)/Yeast

Match Rank:4
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:CTCSGCGG
CCCCGCG-

CHA4/MA0283.1/Jaspar

Match Rank:5
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-CTCSGCGG
TCTCCGCC-

PDR1/MA0352.1/Jaspar

Match Rank:6
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CTCSGCGG-
-TCCGCGGA

PDR3/MA0353.1/Jaspar

Match Rank:7
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CTCSGCGG-
-TCCGCGGA

PDR3/Literature(Harbison)/Yeast

Match Rank:8
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CTCSGCGG-
-TCCGCGGA

PDR3(MacIsaac)/Yeast

Match Rank:9
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CTCSGCGG-
-TCCGCGGA

RDS1/MA0361.1/Jaspar

Match Rank:10
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CTCSGCGG
-NCGGCCG