Homer de novo Motif Results (/srv/scratch/training_camp/tc2016/user23/analysis/motifs/DMSO_1_S31_R1.trimmed.nodup_peaks.narrowPeak/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 4287
Total background sequences = 21561
* - possible false positive

Rank	Motif	P-value	log P-pvalue	% of Targets	% of Background	STD(Bg STD)	Best Match/Details	Motif File
1		1e-229	-5.274e+02	23.14%	7.34%	300.3bp (196.9bp)	REB1(MacIsaac)/Yeast(0.994) More Information \| Similar Motifs Found	motif file (matrix)
2		1e-93	-2.157e+02	32.89%	19.54%	324.4bp (227.4bp)	RSC3/MA0374.1/Jaspar(0.929) More Information \| Similar Motifs Found	motif file (matrix)
3		1e-71	-1.653e+02	54.72%	41.07%	331.4bp (196.9bp)	hb/dmmpmm(SeSiMCMC)/fly(0.874) More Information \| Similar Motifs Found	motif file (matrix)
4		1e-51	-1.188e+02	37.37%	26.74%	369.3bp (230.1bp)	RDS1/MA0361.1/Jaspar(0.718) More Information \| Similar Motifs Found	motif file (matrix)
5		1e-44	-1.026e+02	36.20%	26.40%	308.3bp (195.6bp)	TATA-box/SacCer-Promoters/Homer(0.872) More Information \| Similar Motifs Found	motif file (matrix)
6		1e-42	-9.748e+01	10.31%	5.10%	392.7bp (187.5bp)	TOD6?/SacCer-Promoters/Homer(0.948) More Information \| Similar Motifs Found	motif file (matrix)
7		1e-33	-7.626e+01	17.73%	11.45%	387.3bp (201.5bp)	DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer(0.796) More Information \| Similar Motifs Found	motif file (matrix)
8		1e-28	-6.656e+01	16.07%	10.45%	350.6bp (215.3bp)	PHD1/MA0355.1/Jaspar(0.719) More Information \| Similar Motifs Found	motif file (matrix)
9		1e-27	-6.301e+01	7.07%	3.57%	251.8bp (189.1bp)	INO2/INO2_YPD/1-INO4,2-INO2(Harbison)/Yeast(0.913) More Information \| Similar Motifs Found	motif file (matrix)
10		1e-26	-6.083e+01	25.29%	18.64%	298.2bp (197.5bp)	MET31(MacIsaac)/Yeast(0.844) More Information \| Similar Motifs Found	motif file (matrix)
11		1e-21	-4.867e+01	4.90%	2.37%	327.2bp (192.0bp)	RPH1/Literature(Harbison)/Yeast(0.714) More Information \| Similar Motifs Found	motif file (matrix)
12		1e-18	-4.209e+01	1.91%	0.60%	253.0bp (202.4bp)	Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer(0.746) More Information \| Similar Motifs Found	motif file (matrix)
13		1e-14	-3.286e+01	14.44%	10.62%	339.7bp (218.7bp)	Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer(0.786) More Information \| Similar Motifs Found	motif file (matrix)