Information for 11-GTGCACGG (Motif 8)


Reverse Opposite:

p-value:1e-28
log p-value:-6.656e+01
Information Content per bp:1.597
Number of Target Sequences with motif689.0
Percentage of Target Sequences with motif16.07%
Number of Background Sequences with motif2254.0
Percentage of Background Sequences with motif10.45%
Average Position of motif in Targets460.7 +/- 350.6bp
Average Position of motif in Background272.8 +/- 215.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PHD1/MA0355.1/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GTGCACGG
NGNTGCAGGN

FHL1(MacIsaac)/Yeast

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GTGCACGG--
ATGTACGGAT

SFP1(MacIsaac)/Yeast

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GTGCACGG--
ATGTACGGGT

FHL1/FHL1_YPD/47-RAP1(Harbison)/Yeast

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GTGCACGG---
ATGTACGGGTG

LEC2/MA0581.1/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GTGCACGG-
ATGTGCATGNN

SPL14(SBP)/Arabidopsis thaliana/AthaMap

Match Rank:6
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----GTGCACGG------
CCCTNCTGTACGGACGNNA

SPL14/MA0586.1/Jaspar

Match Rank:7
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----GTGCACGG------
CCCTNCTGTACGGACGNNA

AtLEC2(ABI3/VP1)/Arabidopsis thaliana/AthaMap

Match Rank:8
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GTGCACGG-
TTTGCATGGA

SFP1/SFP1_SM/50-RAP1(Harbison)/Yeast

Match Rank:9
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GTGCACGG--
ATGTACGGGT

RAP1/RAP1_YPD/85-RAP1(Harbison)/Yeast

Match Rank:10
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GTGCACGG---
-TGTACGGGTG