Information for 4-CGGSCCGS (Motif 4)


Reverse Opposite:

p-value:1e-51
log p-value:-1.188e+02
Information Content per bp:1.548
Number of Target Sequences with motif1602.0
Percentage of Target Sequences with motif37.37%
Number of Background Sequences with motif5766.7
Percentage of Background Sequences with motif26.74%
Average Position of motif in Targets457.8 +/- 369.3bp
Average Position of motif in Background278.1 +/- 230.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.61
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RDS1/MA0361.1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CGGSCCGS
NCGGCCG-

STB4/STB4_YPD/[](Harbison)/Yeast

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CGGSCCGS
TCGNNCCGA

STB4(MacIsaac)/Yeast

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CGGSCCGS
TCGNNCCGA

RDS1(MacIsaac)/Yeast

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CGGSCCGS
-CGGCCG-

STP1(MacIsaac)/Yeast

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CGGSCCGS-
-GCGCCGCA

STP1/MA0394.1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CGGSCCGS-
-GCGCCGCA

SKN7(MacIsaac)/Yeast

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CGGSCCGS-
-GGCCCGGA

ERF112/MA1002.1/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CGGSCCGS--
GCCGCCGCCA

CRF4/MA0976.1/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CGGSCCGS-
-GCGCCGCC

CRF2/MA0975.1/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CGGSCCGS-
-CCGCCGCC