Information for 2-CGCGYGGC (Motif 2)


Reverse Opposite:

p-value:1e-93
log p-value:-2.157e+02
Information Content per bp:1.590
Number of Target Sequences with motif1410.0
Percentage of Target Sequences with motif32.89%
Number of Background Sequences with motif4215.0
Percentage of Background Sequences with motif19.54%
Average Position of motif in Targets425.6 +/- 324.4bp
Average Position of motif in Background273.1 +/- 227.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.55
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RSC3/MA0374.1/Jaspar

Match Rank:1
Score:0.93
Offset:0
Orientation:forward strand
Alignment:CGCGYGGC
CGCGCGG-

MBP1/MA0329.1/Jaspar

Match Rank:2
Score:0.90
Offset:-2
Orientation:reverse strand
Alignment:--CGCGYGGC
NNCGCGT---

Tcfl5/MA0632.1/Jaspar

Match Rank:3
Score:0.85
Offset:-2
Orientation:forward strand
Alignment:--CGCGYGGC
GGCACGTGCC

RSC30/MA0375.1/Jaspar

Match Rank:4
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--CGCGYGGC
CGCGCGCG--

SWI6(MacIsaac)/Yeast

Match Rank:5
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:CGCGYGGC
CGCGTC--

CMTA2/MA0969.1/Jaspar

Match Rank:6
Score:0.81
Offset:-4
Orientation:forward strand
Alignment:----CGCGYGGC
AAACCGCGT---

Hes1/MA1099.1/Jaspar

Match Rank:7
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--CGCGYGGC
NNCGCGTGNN

MBP1::SWI6/MA0330.1/Jaspar

Match Rank:8
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--CGCGYGGC
AACGCGT---

CMTA3/MA0970.1/Jaspar

Match Rank:9
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-CGCGYGGC
CCGCGTTAC

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:10
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---CGCGYGGC
TAGCGCGC---