Information for 9-KCGCRCTM (Motif 7)


Reverse Opposite:

p-value:1e-33
log p-value:-7.626e+01
Information Content per bp:1.647
Number of Target Sequences with motif760.0
Percentage of Target Sequences with motif17.73%
Number of Background Sequences with motif2468.9
Percentage of Background Sequences with motif11.45%
Average Position of motif in Targets438.7 +/- 387.3bp
Average Position of motif in Background281.7 +/- 201.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:1
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:KCGCRCTM
GCGCGCTA

Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer

Match Rank:2
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:KCGCRCTM-
-CTCTCTCY

Trl/dmmpmm(Pollard)/fly

Match Rank:3
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--KCGCRCTM
TTGCTCTCTC

Trl/MA0205.1/Jaspar

Match Rank:4
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--KCGCRCTM
TTGCTCTCTC

DAL82/MA0291.1/Jaspar

Match Rank:5
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:KCGCRCTM-
GCGCACATT

STP3/MA0396.1/Jaspar

Match Rank:6
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:KCGCRCTM--
-TGCGCTAGC

z/dmmpmm(Down)/fly

Match Rank:7
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:KCGCRCTM-
---CACTCA

STP4/MA0397.1/Jaspar

Match Rank:8
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:KCGCRCTM--
-TGCGCTATC

FHY3/MA0557.1/Jaspar

Match Rank:9
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---KCGCRCTM-
CTCACGCGCTCA

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:KCGCRCTM---
-NSCACTYVAV