# Parameters
data_name = "Mecom"
task_idxs = "0-213,216-278"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
overwrite = False

from matlas.reports import collect_motifDB_to_be_displayed, display_comparative_cell_types

load data from labcluster

Using TensorFlow backend.
2019-08-23 11:19:01,854 [WARNING] git-lfs not installed

homer_matches, modisco_matches = collect_motifDB_to_be_displayed(task_idxs, homer_root, modisco_root, 
                                                              overwrite=False)

TF-MoDISco is using the TensorFlow backend.

display_comparative_cell_types(data_name, homer_matches, modisco_matches)

Mecom: Motif: M08980_2.00

Forward PWM

Reverse PWM

Shared Cell types both TF-MoDISco and Homer finds Mecom: #2

Cell type	Modisco	Homer
BSPHL;A;CL	Pattern: metacluster_1/pattern_8 Significance: 0.00803532	Pattern: motif7.motif Significance: 0.0274709
SKN_EPTHL;A;GEO	Pattern: metacluster_0/pattern_6 Significance: 0.0589707	Pattern: motif14.motif Significance: 0.0376179

Unique Cell types only TF-MoDISco finds Mecom: #19

Cell type	Modisco	Homer
STMCH;P0;D;En	Pattern: metacluster_1/pattern_17 Significance: 0.00811384	Absent
ILC2+IL33+IL25;A;GEO	Pattern: metacluster_1/pattern_9 Significance: 0.014247399999999999	Absent
ILC2_AbxGRMFree;A;GEO	Pattern: metacluster_1/pattern_14 Significance: 0.05168009999999999	Absent
T_SPLND_blstCLTRD;CD4+;D;GEO	Pattern: metacluster_1/pattern_13 Significance: 0.0391332	Absent
DP3a;A;CL	Pattern: metacluster_1/pattern_15 Significance: 0.05166849999999999	Absent
apCD4Eff;D;GEO	Pattern: metacluster_1/pattern_16 Significance: 0.028206799999999997	Absent
ILC2precrsr;A;CL	Pattern: metacluster_1/pattern_6 Significance: 0.00655018	Absent
Mast;A;CL	Pattern: metacluster_0/pattern_7 Significance: 0.00569829	Absent
NCR+ILC3;A;CL	Pattern: metacluster_1/pattern_18 Significance: 0.028975	Absent
MTR_NRN_MN1;methyl3;D;En	Pattern: metacluster_0/pattern_14 Significance: 0.00770857	Absent
MN1;D;En	Pattern: metacluster_1/pattern_20 Significance: 0.0181597	Absent
ENDRM_ESD;A;GEO	Pattern: metacluster_1/pattern_13 Significance: 0.05865359999999999	Absent
SML_INTSTN;A;CL	Pattern: metacluster_0/pattern_16 Significance: 0.00663254	Absent
LRG_INTSTN;A;CL	Pattern: metacluster_0/pattern_12 Significance: 0.0121711	Absent
ILC2_Nippo;A;CL	Pattern: metacluster_1/pattern_10 Significance: 0.0207935	Absent
ILC2;A;CL	Pattern: metacluster_1/pattern_5 Significance: 0.014242099999999999	Absent
Th2_nippo;A;CL	Pattern: metacluster_1/pattern_10 Significance: 0.0076961	Absent
placenta;A;CL	Pattern: metacluster_0/pattern_17 Significance: 0.0366099	Absent
STMCH;A;CL	Pattern: metacluster_1/pattern_23 Significance: 0.0343723	Absent

Unique Cell types only Homer finds Mecom: #3

Cell type	Modisco	Homer
416B_MP;CD34+;D;En	Absent	Pattern: motif9.motif Significance: 0.0470257
MEL_Znc_di-cl;24h;D;En	Absent	Pattern: motif6.motif Significance: 0.049576199999999994
MegEP;A;CL	Absent	Pattern: motif2.motif Significance: 0.010764600000000001