Homer de novo Motif Results (/srv/scratch/training_camp/tc2016/user23/analysis/motifs/It_800_S11_R1.trimmed.nodup_peaks.narrowPeak/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 4269
Total background sequences = 20217
* - possible false positive

Rank	Motif	P-value	log P-pvalue	% of Targets	% of Background	STD(Bg STD)	Best Match/Details	Motif File
1		1e-191	-4.418e+02	27.41%	10.99%	313.1bp (225.9bp)	REB1(MacIsaac)/Yeast(0.994) More Information \| Similar Motifs Found	motif file (matrix)
2		1e-91	-2.101e+02	44.07%	29.37%	345.5bp (221.1bp)	PB0182.1_Srf_2/Jaspar(0.898) More Information \| Similar Motifs Found	motif file (matrix)
3		1e-85	-1.973e+02	35.80%	22.51%	334.2bp (260.0bp)	RSC30/MA0375.1/Jaspar(0.957) More Information \| Similar Motifs Found	motif file (matrix)
4		1e-49	-1.130e+02	7.59%	3.00%	299.4bp (217.7bp)	TYE7(MacIsaac)/Yeast(0.992) More Information \| Similar Motifs Found	motif file (matrix)
5		1e-48	-1.118e+02	37.58%	27.22%	324.4bp (218.3bp)	TATA-box/SacCer-Promoters/Homer(0.875) More Information \| Similar Motifs Found	motif file (matrix)
6		1e-42	-9.789e+01	17.99%	10.90%	297.5bp (205.3bp)	FHL1(MacIsaac)/Yeast(0.765) More Information \| Similar Motifs Found	motif file (matrix)
7		1e-32	-7.547e+01	19.92%	13.29%	330.9bp (247.3bp)	YPR022C/MA0436.1/Jaspar(0.804) More Information \| Similar Motifs Found	motif file (matrix)
8		1e-27	-6.263e+01	11.72%	7.07%	272.3bp (205.4bp)	OPI1/Literature(Harbison)/Yeast(0.895) More Information \| Similar Motifs Found	motif file (matrix)
9		1e-26	-6.003e+01	5.18%	2.33%	353.3bp (210.4bp)	RPH1/Literature(Harbison)/Yeast(0.711) More Information \| Similar Motifs Found	motif file (matrix)
10		1e-24	-5.538e+01	22.63%	16.56%	334.0bp (214.2bp)	CHA4/MA0283.1/Jaspar(0.716) More Information \| Similar Motifs Found	motif file (matrix)
11		1e-24	-5.527e+01	9.09%	5.26%	302.2bp (235.3bp)	IME1(MacIsaac)/Yeast(0.678) More Information \| Similar Motifs Found	motif file (matrix)
12		1e-23	-5.409e+01	8.67%	4.97%	294.5bp (223.5bp)	MSN2(MacIsaac)/Yeast(0.892) More Information \| Similar Motifs Found	motif file (matrix)
13		1e-20	-4.681e+01	11.18%	7.20%	344.7bp (192.2bp)	CHA4(MacIsaac)/Yeast(0.872) More Information \| Similar Motifs Found	motif file (matrix)
14		1e-19	-4.434e+01	2.74%	1.04%	268.8bp (246.3bp)	RDS1/RDS1_H2O2Hi/[](Harbison)/Yeast(0.756) More Information \| Similar Motifs Found	motif file (matrix)
15		1e-15	-3.483e+01	29.55%	24.19%	325.7bp (201.4bp)	ABF2/MA0266.1/Jaspar(0.637) More Information \| Similar Motifs Found	motif file (matrix)
16		1e-14	-3.246e+01	8.04%	5.22%	283.7bp (208.3bp)	SFP1(MacIsaac)/Yeast(0.863) More Information \| Similar Motifs Found	motif file (matrix)
17 *		1e-11	-2.558e+01	19.12%	15.28%	333.7bp (208.5bp)	PB0208.1_Zscan4_2/Jaspar(0.687) More Information \| Similar Motifs Found	motif file (matrix)