Information for 19-TGAGATGA (Motif 13)


Reverse Opposite:

p-value:1e-20
log p-value:-4.681e+01
Information Content per bp:1.914
Number of Target Sequences with motif477.0
Percentage of Target Sequences with motif11.18%
Number of Background Sequences with motif1455.9
Percentage of Background Sequences with motif7.20%
Average Position of motif in Targets394.4 +/- 344.7bp
Average Position of motif in Background288.8 +/- 192.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CHA4(MacIsaac)/Yeast

Match Rank:1
Score:0.87
Offset:0
Orientation:forward strand
Alignment:TGAGATGA-
TGCGATGAG

TOD6?/SacCer-Promoters/Homer

Match Rank:2
Score:0.81
Offset:1
Orientation:forward strand
Alignment:TGAGATGA---
-GCGATGAGMT

DOT6/MA0351.1/Jaspar

Match Rank:3
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----TGAGATGA---------
ANGANGCGATGAGGTGCNNNN

TOD6/MA0350.1/Jaspar

Match Rank:4
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----TGAGATGA---------
NNANNGCGATGAGCTNNNNNN

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:5
Score:0.71
Offset:3
Orientation:forward strand
Alignment:TGAGATGA-
---CATGAC

SREBF2/MA0596.1/Jaspar

Match Rank:6
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TGAGATGA-
ATGGGGTGAT

SREBF1/MA0595.1/Jaspar

Match Rank:7
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TGAGATGA-
GTGGGGTGAT

Atf3/MA0605.1/Jaspar

Match Rank:8
Score:0.68
Offset:3
Orientation:forward strand
Alignment:TGAGATGA---
---GATGACGT

Tal1

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TGAGATGA
-CAGATG-

PB0098.1_Zfp410_1/Jaspar

Match Rank:10
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TGAGATGA----
TATTATGGGATGGATAA