Information for 9-TGCACGGA (Motif 6)


Reverse Opposite:

p-value:1e-42
log p-value:-9.789e+01
Information Content per bp:1.816
Number of Target Sequences with motif768.0
Percentage of Target Sequences with motif17.99%
Number of Background Sequences with motif2204.7
Percentage of Background Sequences with motif10.90%
Average Position of motif in Targets431.8 +/- 297.5bp
Average Position of motif in Background286.3 +/- 205.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

FHL1(MacIsaac)/Yeast

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-TGCACGGA-
ATGTACGGAT

SPL14(SBP)/Arabidopsis thaliana/AthaMap

Match Rank:2
Score:0.76
Offset:-6
Orientation:reverse strand
Alignment:------TGCACGGA-----
CCCTNCTGTACGGACGNNA

SPL14/MA0586.1/Jaspar

Match Rank:3
Score:0.76
Offset:-6
Orientation:reverse strand
Alignment:------TGCACGGA-----
CCCTNCTGTACGGACGNNA

FHL1/FHL1_YPD/47-RAP1(Harbison)/Yeast

Match Rank:4
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TGCACGGA--
ATGTACGGGTG

YKL222C/MA0428.1/Jaspar

Match Rank:5
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TGCACGGA---
--AACGGAAAT

SFP1/SFP1_SM/50-RAP1(Harbison)/Yeast

Match Rank:6
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TGCACGGA-
ATGTACGGGT

SFP1(MacIsaac)/Yeast

Match Rank:7
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TGCACGGA-
ATGTACGGGT

AtLEC2(ABI3/VP1)/Arabidopsis thaliana/AthaMap

Match Rank:8
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TGCACGGA
TTTGCATGGA

SPL11/MA1056.1/Jaspar

Match Rank:9
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TGCACGGA-
TATCGTACGGAT

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:10
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGCACGGA-
TBGCACGCAA