Information for 15-CCGGCTAG (Motif 11)


Reverse Opposite:

p-value:1e-24
log p-value:-5.527e+01
Information Content per bp:1.796
Number of Target Sequences with motif388.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif1063.4
Percentage of Background Sequences with motif5.26%
Average Position of motif in Targets445.0 +/- 302.2bp
Average Position of motif in Background296.3 +/- 235.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

IME1(MacIsaac)/Yeast

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CCGGCTAG
CCGCCGAG

IME1/MA0320.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCGGCTAG
CCGCCGAG

UME6/UME6_YPD/51-UME6(Harbison)/Yeast

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CCGGCTAG
TCGGCGGCTA-

ERF6/MA1006.1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CCGGCTAG
CTGCCGGCGT-

SMAD3/MA0795.1/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CCGGCTAG---
-CGTCTAGACA

ERF105/MA1000.1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCGGCTAG
TGCCGGCG--

UME6(MacIsaac)/Yeast

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCGGCTAG
TCGGCGGCTA-

CAT8/MA0280.1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCGGCTAG
NTCCGG----

YDR026c/YDR026c_YPD/[](Harbison)/Yeast

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCGGCTAG-
GCCGGGTAAA

YDR026C(MacIsaac)/Yeast

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCGGCTAG
CCGGGT--