Information for 22-CCCATACA (Motif 16)


Reverse Opposite:

p-value:1e-14
log p-value:-3.246e+01
Information Content per bp:1.915
Number of Target Sequences with motif343.0
Percentage of Target Sequences with motif8.04%
Number of Background Sequences with motif1055.6
Percentage of Background Sequences with motif5.22%
Average Position of motif in Targets401.5 +/- 283.7bp
Average Position of motif in Background301.7 +/- 208.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SFP1(MacIsaac)/Yeast

Match Rank:1
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-CCCATACA-
ACCCGTACAT

SFP1/SFP1_SM/50-RAP1(Harbison)/Yeast

Match Rank:2
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-CCCATACA-
ACCCGTACAT

RAP1/MA0359.1/Jaspar

Match Rank:3
Score:0.85
Offset:-2
Orientation:forward strand
Alignment:--CCCATACA
CACCCATACA

RAP1/RAP1_YPD/85-RAP1(Harbison)/Yeast

Match Rank:4
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--CCCATACA
CACCCGTACA

RAP1(MacIsaac)/Yeast

Match Rank:5
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---CCCATACA-
ACACCCATACAC

FHL1/FHL1_YPD/47-RAP1(Harbison)/Yeast

Match Rank:6
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--CCCATACA-
CACCCGTACAT

FHL1(MacIsaac)/Yeast

Match Rank:7
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CCCATACA-
ATCCGTACAT

sma-4/MA0925.1/Jaspar

Match Rank:8
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CCCATACA--
NNCCAGACANN

POPTR_0002s00440g/MA0955.1/Jaspar

Match Rank:9
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CCCATACA
-CCGTACN

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CCCATACA-----
CAAATCCAGACATCACA