Information for 24-TGTGCBAC (Motif 17)


Reverse Opposite:

p-value:1e-11
log p-value:-2.558e+01
Information Content per bp:1.585
Number of Target Sequences with motif816.0
Percentage of Target Sequences with motif19.12%
Number of Background Sequences with motif3089.6
Percentage of Background Sequences with motif15.28%
Average Position of motif in Targets418.3 +/- 333.7bp
Average Position of motif in Background294.4 +/- 208.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.69
Offset:-7
Orientation:reverse strand
Alignment:-------TGTGCBAC-
NNNNTTGTGTGCTTNN

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------TGTGCBAC-
NNGCGTGTGTGCNGCN

Achi/dmmpmm(Noyes_hd)/fly

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGTGCBAC
GCTGTCAAAN

vis/MA0252.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGTGCBAC
CTGTCA---

POL002.1_INR/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGCBAC
NNNANTGA-----

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TGTGCBAC-
AGGTGHCAGACA

MEIS1/MA0498.2/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGTGCBAC
NTGTCAN--

MATA1(MacIsaac)/Yeast

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGTGCBAC
ATTGTGC---

HMRA1/MA0327.1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGTGCBAC
ATTGTGC---

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TGTGCBAC
GCTGTG----