Information for 16-GGCCCCTT (Motif 12)


Reverse Opposite:

p-value:1e-23
log p-value:-5.409e+01
Information Content per bp:1.811
Number of Target Sequences with motif370.0
Percentage of Target Sequences with motif8.67%
Number of Background Sequences with motif1005.4
Percentage of Background Sequences with motif4.97%
Average Position of motif in Targets374.2 +/- 294.5bp
Average Position of motif in Background297.9 +/- 223.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MSN2(MacIsaac)/Yeast

Match Rank:1
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:GGCCCCTT
-GCCCCTT

MSN4(MacIsaac)/Yeast

Match Rank:2
Score:0.87
Offset:1
Orientation:reverse strand
Alignment:GGCCCCTT
-CCCCCTT

MSN4/Literature(Harbison)/Yeast

Match Rank:3
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:GGCCCCTT
-NCCCCTG

MSN2/MSN2_H2O2Hi/1-MSN2(Harbison)/Yeast

Match Rank:4
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-GGCCCCTT
CCGCCCCTT

RGM1/MA0366.1/Jaspar

Match Rank:5
Score:0.80
Offset:2
Orientation:reverse strand
Alignment:GGCCCCTT
--CCCCT-

MSN4/MA0342.1/Jaspar

Match Rank:6
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:GGCCCCTT
--CCCCT-

NRG1/NRG1_H2O2Hi/[](Harbison)/Yeast

Match Rank:7
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GGCCCCTT
GGACCCT-

GIS1/MA0306.1/Jaspar

Match Rank:8
Score:0.75
Offset:1
Orientation:forward strand
Alignment:GGCCCCTT--
-ACCCCTAAA

MSN2/MA0341.1/Jaspar

Match Rank:9
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:GGCCCCTT
--CCCCT-

NRG1/MA0347.1/Jaspar

Match Rank:10
Score:0.74
Offset:-6
Orientation:reverse strand
Alignment:------GGCCCCTT------
NGCNNTGGACCCTGATNNNG