Homer de novo Motif Results (/srv/scratch/training_camp/tc2016/user23/analysis/motifs/Cz_3_S18_R1.trimmed.nodup_peaks.narrowPeak/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 4214
Total background sequences = 20889
* - possible false positive

Rank	Motif	P-value	log P-pvalue	% of Targets	% of Background	STD(Bg STD)	Best Match/Details	Motif File
1		1e-211	-4.872e+02	23.16%	7.68%	300.6bp (220.1bp)	REB1(MacIsaac)/Yeast(0.991) More Information \| Similar Motifs Found	motif file (matrix)
2		1e-76	-1.768e+02	35.33%	22.68%	330.8bp (242.9bp)	RSC30/MA0375.1/Jaspar(0.877) More Information \| Similar Motifs Found	motif file (matrix)
3		1e-60	-1.397e+02	48.73%	36.28%	326.3bp (194.8bp)	PB0192.1_Tcfap2e_2/Jaspar(0.892) More Information \| Similar Motifs Found	motif file (matrix)
4		1e-47	-1.096e+02	6.19%	2.19%	295.2bp (212.7bp)	TYE7(MacIsaac)/Yeast(0.996) More Information \| Similar Motifs Found	motif file (matrix)
5		1e-41	-9.596e+01	25.60%	17.24%	353.8bp (218.6bp)	PDR1/MA0352.1/Jaspar(0.913) More Information \| Similar Motifs Found	motif file (matrix)
6		1e-41	-9.512e+01	40.76%	30.88%	338.2bp (197.5bp)	TATA-box/SacCer-Promoters/Homer(0.875) More Information \| Similar Motifs Found	motif file (matrix)
7		1e-39	-9.081e+01	8.02%	3.62%	351.2bp (217.0bp)	POL009.1_DCE_S_II/Jaspar(0.761) More Information \| Similar Motifs Found	motif file (matrix)
8		1e-37	-8.730e+01	15.68%	9.37%	333.9bp (233.4bp)	SWI6(MacIsaac)/Yeast(0.878) More Information \| Similar Motifs Found	motif file (matrix)
9		1e-35	-8.217e+01	10.65%	5.67%	263.4bp (198.7bp)	OPI1/Literature(Harbison)/Yeast(0.902) More Information \| Similar Motifs Found	motif file (matrix)
10		1e-32	-7.424e+01	16.82%	10.73%	317.4bp (212.5bp)	STP3/MA0396.1/Jaspar(0.825) More Information \| Similar Motifs Found	motif file (matrix)
11		1e-29	-6.841e+01	10.34%	5.81%	328.3bp (205.3bp)	TOD6?/SacCer-Promoters/Homer(0.941) More Information \| Similar Motifs Found	motif file (matrix)
12		1e-26	-6.086e+01	11.72%	7.10%	357.5bp (247.8bp)	SKN7(MacIsaac)/Yeast(0.885) More Information \| Similar Motifs Found	motif file (matrix)
13		1e-24	-5.580e+01	20.43%	14.57%	340.4bp (229.4bp)	SeqBias: CA-repeat(0.854) More Information \| Similar Motifs Found	motif file (matrix)
14		1e-19	-4.474e+01	5.27%	2.70%	329.9bp (212.5bp)	PB0008.1_E2F2_1/Jaspar(0.721) More Information \| Similar Motifs Found	motif file (matrix)
15		1e-16	-3.729e+01	1.61%	0.49%	288.7bp (195.5bp)	IME1(MacIsaac)/Yeast(0.749) More Information \| Similar Motifs Found	motif file (matrix)
16 *		1e-7	-1.792e+01	19.24%	16.03%	287.4bp (189.2bp)	PB0091.1_Zbtb3_1/Jaspar(0.655) More Information \| Similar Motifs Found	motif file (matrix)