Information for 12-TCGCGCTA (Motif 10)


Reverse Opposite:

p-value:1e-32
log p-value:-7.424e+01
Information Content per bp:1.783
Number of Target Sequences with motif709.0
Percentage of Target Sequences with motif16.82%
Number of Background Sequences with motif2242.1
Percentage of Background Sequences with motif10.73%
Average Position of motif in Targets395.0 +/- 317.4bp
Average Position of motif in Background278.7 +/- 212.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

STP3/MA0396.1/Jaspar

Match Rank:1
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:TCGCGCTA--
-TGCGCTAGC

STP4/MA0397.1/Jaspar

Match Rank:2
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:TCGCGCTA--
-TGCGCTATC

DPL-1(E2F)/cElegans-Adult-ChIP-Seq(modEncode)/Homer

Match Rank:3
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TCGCGCTA
GCGCGCTA

RSC3/MA0374.1/Jaspar

Match Rank:4
Score:0.74
Offset:1
Orientation:forward strand
Alignment:TCGCGCTA
-CGCGCGG

FHY3/MA0557.1/Jaspar

Match Rank:5
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---TCGCGCTA-
CTCACGCGCTCA

MBP1/MA0329.1/Jaspar

Match Rank:6
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TCGCGCTA
NNCGCGT--

ZBED1/MA0749.1/Jaspar

Match Rank:7
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TCGCGCTA-
TATGTCGCGATAG

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:8
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----TCGCGCTA
VDTTTCCCGCCA

FHY3(FAR1)/Arabidopsis-FHY3-ChIP-Seq(GSE30711)/Homer

Match Rank:9
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TCGCGCTA-
HHCACGCGCBTN

MBP1::SWI6/MA0330.1/Jaspar

Match Rank:10
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TCGCGCTA
ACGCGTT-