Information for 9-CCCTGTGC (Motif 7)


Reverse Opposite:

p-value:1e-39
log p-value:-9.081e+01
Information Content per bp:1.889
Number of Target Sequences with motif338.0
Percentage of Target Sequences with motif8.02%
Number of Background Sequences with motif757.4
Percentage of Background Sequences with motif3.62%
Average Position of motif in Targets440.4 +/- 351.2bp
Average Position of motif in Background274.6 +/- 217.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:forward strand
Alignment:CCCTGTGC
-GCTGTG-

CDC5(MYB)/Arabidopsis thaliana/AthaMap

Match Rank:2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGTGC-
CGCGCTGAGCN

CDC5/MA0579.1/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGTGC-
CGCGCTGAGCN

dpy-27/MA0540.1/Jaspar

Match Rank:4
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CCCTGTGC-----
TCTCCCTGCGCGATAA

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CCCTGTGC----
--CTGTTCCTGG

MET28/MA0332.1/Jaspar

Match Rank:6
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CCCTGTGC
--CTGTGG

MET28(MacIsaac)/Yeast

Match Rank:7
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CCCTGTGC
--CTGTGG

REI1/MA0364.1/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CCCTGTGC
CCCCTGA--

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCCTGTGC-
WDNCTGGGCA

SUT1?/SacCer-Promoters/Homer

Match Rank:10
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCCTGTGC
CCCCGCGC