Information for 22-TAAGGCGC (Motif 14)


Reverse Opposite:

p-value:1e-19
log p-value:-4.474e+01
Information Content per bp:1.917
Number of Target Sequences with motif222.0
Percentage of Target Sequences with motif5.27%
Number of Background Sequences with motif563.4
Percentage of Background Sequences with motif2.70%
Average Position of motif in Targets438.7 +/- 329.9bp
Average Position of motif in Background284.8 +/- 212.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0008.1_E2F2_1/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--TAAGGCGC-----
ATAAAGGCGCGCGAT

MSN2(MacIsaac)/Yeast

Match Rank:2
Score:0.72
Offset:1
Orientation:forward strand
Alignment:TAAGGCGC
-AAGGGGC

PB0009.1_E2F3_1/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TAAGGCGC-----
ATAAGGGCGCGCGAT

MSN4(MacIsaac)/Yeast

Match Rank:4
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TAAGGCGC
-AAGGGGG

E2F1/MA0024.3/Jaspar

Match Rank:5
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TAAGGCGC----
TTTGGCGCCAAA

MSN4/Literature(Harbison)/Yeast

Match Rank:6
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TAAGGCGC
-AAGGGGN

RPH1/MA0372.1/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TAAGGCGC
TTAGGGGT

RPH1/Literature(Harbison)/Yeast

Match Rank:8
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TAAGGCGC
CCTTAAGGGG-

RPH1(MacIsaac)/Yeast

Match Rank:9
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TAAGGCGC
CCTTAAGGGG-

POL006.1_BREu/Jaspar

Match Rank:10
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TAAGGCGC---
---GGCGCGCT