Information for 10-CGCGTCGC (Motif 8)


Reverse Opposite:

p-value:1e-37
log p-value:-8.730e+01
Information Content per bp:1.586
Number of Target Sequences with motif661.0
Percentage of Target Sequences with motif15.68%
Number of Background Sequences with motif1957.7
Percentage of Background Sequences with motif9.37%
Average Position of motif in Targets411.6 +/- 333.9bp
Average Position of motif in Background282.2 +/- 233.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SWI6(MacIsaac)/Yeast

Match Rank:1
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:CGCGTCGC
CGCGTC--

MBP1(MacIsaac)/Yeast

Match Rank:2
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-CGCGTCGC
ACGCGTC--

MBP1/MBP1_H2O2Hi/[](Harbison)/Yeast

Match Rank:3
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-CGCGTCGC
ACGCGTC--

MBP1/MA0329.1/Jaspar

Match Rank:4
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-CGCGTCGC
ACGCGTA--

MBP1::SWI6/MA0330.1/Jaspar

Match Rank:5
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-CGCGTCGC
ACGCGTT--

RSC3/MA0374.1/Jaspar

Match Rank:6
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---CGCGTCGC
NNGCGCG----

CMTA3/MA0970.1/Jaspar

Match Rank:7
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-CGCGTCGC
CCGCGTTAC

CMTA2/MA0969.1/Jaspar

Match Rank:8
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----CGCGTCGC
AAACCGCGT---

STP1(MacIsaac)/Yeast

Match Rank:9
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CGCGTCGC
TGCGGCGC

Mad/dmmpmm(Down)/fly

Match Rank:10
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CGCGTCGC---
CGCGACGCCAG