Information for 7-CTCCGCGG (Motif 5)


Reverse Opposite:

p-value:1e-41
log p-value:-9.596e+01
Information Content per bp:1.596
Number of Target Sequences with motif1079.0
Percentage of Target Sequences with motif25.60%
Number of Background Sequences with motif3603.8
Percentage of Background Sequences with motif17.24%
Average Position of motif in Targets476.0 +/- 353.8bp
Average Position of motif in Background277.0 +/- 218.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PDR1/MA0352.1/Jaspar

Match Rank:1
Score:0.91
Offset:1
Orientation:reverse strand
Alignment:CTCCGCGG-
-TCCGCGGA

IME1/MA0320.1/Jaspar

Match Rank:2
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:CTCCGCGG
CTCGGCGG

IME1(MacIsaac)/Yeast

Match Rank:3
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:CTCCGCGG
CTCGGCGG

PDR3/MA0353.1/Jaspar

Match Rank:4
Score:0.88
Offset:1
Orientation:forward strand
Alignment:CTCCGCGG-
-TCCGCGGA

PDR3/Literature(Harbison)/Yeast

Match Rank:5
Score:0.88
Offset:1
Orientation:forward strand
Alignment:CTCCGCGG-
-TCCGCGGA

PDR3(MacIsaac)/Yeast

Match Rank:6
Score:0.88
Offset:1
Orientation:forward strand
Alignment:CTCCGCGG-
-TCCGCGGA

SUT1/MA0399.1/Jaspar

Match Rank:7
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CTCCGCGG
CCCCGCG-

SUT1(MacIsaac)/Yeast

Match Rank:8
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CTCCGCGG
CCCCGCG-

CHA4/MA0283.1/Jaspar

Match Rank:9
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CTCCGCGG
TCTCCGCC-

HAL9/MA0311.1/Jaspar

Match Rank:10
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CTCCGCGG
TTCCG---