Index of /kundaje/marinovg/oak/various/ENCODE4/single-cell/2023-03-17-NovaSeq
Name
Last modified
Size
Description
Parent Directory
-
ATAC-process-1.sh
2023-03-18 11:21
86K
ATAC-process-2.sh
2023-03-18 11:22
15K
ATAC-process-3.sh
2023-03-18 11:22
17K
ATAC-process-4.sh
2023-03-18 11:23
9.2K
ATAC-process-5.sh
2023-03-18 11:26
42K
ATAC-process-6.sh
2023-03-18 11:28
44K
ATAC-process-7.sh
2023-03-18 11:29
32K
ATACTSSscore.txt
2023-03-19 05:12
6.5K
RNA-process-2.sh
2023-03-18 10:57
646K
RNA-process-3.sh
2023-03-18 11:01
19K
RNA-process-4.sh
2023-03-18 11:02
16K
RNA-process-5.sh
2023-03-18 11:04
26K
RNA-process-6.sh
2023-03-18 11:06
55K
RNA-processing-1.sh
2023-03-18 10:53
40K
SAMstats_ATAC.BC_dedup.table
2023-03-19 06:18
5.4K
SAMstats_ATAC.chrM.table
2023-03-19 06:18
4.8K
SAMstats_ATAC.files
2023-03-18 11:24
23K
SAMstats_ATAC.table
2023-03-19 06:18
15K
SAMstats_ATAC.unique.table
2023-03-19 06:18
5.1K
SAMstats_RNA.files
2023-03-18 10:52
5.1K
SAMstats_RNA.table
2023-03-19 13:29
5.4K
SAMstats_files.tar.gz
2023-03-19 13:30
9.6K
STAR.sh
2023-03-18 10:48
47K
SampleSheet-SHARE-seq.config
2023-03-17 17:51
1.8K
SplitByWells.sh
2023-03-18 10:31
20M
UMI-add-gzip.sh
2023-03-18 09:34
322K
UMI-add.sh
2023-03-18 09:33
1.0M
all.230315_A00509_0687_BH2YMVDSX7.fastq.lines
2023-03-18 15:49
12
barcode-annotate.sh
2023-03-18 16:16
3.3M
barcode_T5_b13_Eye_PCW19
2023-03-17 17:54
267
barcode_T10_b9_Muscle_PCW19
2023-03-17 17:54
267
barcode_T11_b14_Skin_PCW19
2023-03-17 17:54
267
barcode_T23_b17_Thymus_PCW17
2023-03-17 17:54
267
barcode_T35_b10_Stomach_PCW17
2023-03-17 17:54
267
barcode_T40_b16_Adr_PCW17
2023-03-17 17:54
267
barcode_T44_b9_Muscle_PCW17
2023-03-17 17:54
267
barcode_T45_b14_Skin_PCW17
2023-03-17 17:54
267
barcode_T51_b13_Eye_PCW20
2023-03-17 17:54
267
barcode_T53_b10_Stomach_PCW20
2023-03-17 17:54
267
barcode_T60_b14_Skin_PCW20
2023-03-17 17:54
267
barcode_T61_b9_Muscle_PCW20
2023-03-17 17:54
267
barcode_T71_b15_Liver_PCW18
2023-03-17 17:54
267
barcode_T79_b13_Eye_PCW18
2023-03-17 17:54
267
barcode_T85_b14_Skin_PCW18
2023-03-17 17:54
267
barcode_T87_b9_Muscle_PCW18
2023-03-17 17:54
267
barcode_T88_b17_Spleen_PCW18
2023-03-17 17:54
267
barcode_T90_b17_Thymus_PCW18
2023-03-17 17:54
267
barcode_T96_b9_Muscle_PCW17
2023-03-17 17:54
267
barcode_T106_b13_Eye_PCW17
2023-03-17 17:54
267
barcode_T109_b14_Skin_PCW17
2023-03-17 17:54
267
barcode_T123_b9_Muscle_PCW22
2023-03-17 17:54
267
barcode_T136_b16_Thyroid_PCW21
2023-03-17 17:54
267
barcode_T161_b9_Muscle_PCW10
2023-03-17 17:54
267
barcode_T165_b17_Spleen_PCW19
2023-03-17 17:54
267
barcode_T166_b15_Liver_PCW19
2023-03-17 17:54
267
barcode_T176_b16_Thyroid_PCW19
2023-03-17 17:54
267
barcode_T178_b14_Skin_PCW19
2023-03-17 17:54
267
barcode_T180_b13_Eye_PCW19
2023-03-17 17:54
267
barcode_T186_b13_Eye_PCW23
2023-03-17 17:54
267
barcode_T187_b14_Skin_PCW23
2023-03-17 17:54
267
barcode_T233_b17_Thymus_PCW21
2023-03-17 17:54
267
barcode_T235_b15_Liver_PCW21
2023-03-17 17:54
267
barcode_T238_b10_Stomach_PCW21
2023-03-17 17:54
267
barcode_T269_b10_Stomach_PCW18
2023-03-17 17:54
267
barcode_T270_b17_Spleen_PCW18
2023-03-17 17:54
267
barcode_T273_b16_Adr_PCW18
2023-03-17 17:54
267
barcode_T275_b15_Liver_PCW18
2023-03-17 17:54
267
barcode_T303_b10_Esophagus_PCW21
2023-03-17 17:54
267
barcode_T314_b16_Spleen_PCW21
2023-03-17 17:54
267
barcode_T314_b17_Spleen_PCW21
2023-03-17 17:54
267
barcode_T318_b16_Adr_PCW21
2023-03-17 17:54
267
barcode_T322_b10_Stomach_PCW21
2023-03-17 17:54
267
barcode_T350_b15_Liver_PCW21
2023-03-17 17:54
267
barcode_T375_b15_Liver_PCW15
2023-03-17 17:54
267
barcode_T377_b9_Muscle_PCW15
2023-03-17 17:54
267
barcode_T390_b16_Adr_PCW13
2023-03-17 17:54
267
barcode_T398_b15_Liver_PCW17
2023-03-17 17:54
267
barcode_T399_b10_Stomach_PCW17
2023-03-17 17:54
267
barcode_T406_b17_Thymus_PCW19
2023-03-17 17:54
267
barcode_T408S_b14_Skin_PCW19
2023-03-17 17:54
267
barcode_T410_b13_Eye_PCW13
2023-03-17 17:54
267
bcl2fastq.sh
2023-03-17 16:46
212K
cat.sh
2023-03-18 10:35
43K
count_lines.sh
2023-03-18 10:37
23K
demultiplexFASTQDualIndex.sh
2023-03-17 19:05
93K
map-ATAC.sh
2023-03-18 11:16
83K
sam_reads_genes.files
2023-03-18 10:54
5.7K
sam_reads_genes.table
2023-03-19 13:29
4.7K
sam_reads_genes_files.tar.gz
2023-03-19 13:29
2.9K
samtools-index-ATAC-1.sh
2023-03-18 11:17
15K
samtools-index-ATAC-2.sh
2023-03-18 11:24
8.1K
samtools-index-RNA.sh
2023-03-18 10:51
9.6K
z
2023-03-19 14:10
4.7K
zz
2023-03-18 10:38
4.8K
zzz
2023-03-18 10:38
4.5K
Apache/2.4.66 (Ubuntu) Server at mitra.stanford.edu Port 443