python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL230_b17_ATAC_SpleenThymus.T233_b17_Thymus_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL230_b17_ATAC_SpleenThymus.T233_b17_Thymus_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL230_b17_ATAC_SpleenThymus.T23_b17_Thymus_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL230_b17_ATAC_SpleenThymus.T23_b17_Thymus_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL230_b17_ATAC_SpleenThymus.T270_b17_Spleen_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL230_b17_ATAC_SpleenThymus.T270_b17_Spleen_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL230_b17_ATAC_SpleenThymus.T314_b17_Spleen_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL230_b17_ATAC_SpleenThymus.T314_b17_Spleen_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL230_b17_ATAC_SpleenThymus.T406_b17_Thymus_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL230_b17_ATAC_SpleenThymus.T406_b17_Thymus_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL230_b17_ATAC_SpleenThymus.T88_b17_Spleen_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL230_b17_ATAC_SpleenThymus.T88_b17_Spleen_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL230_b17_ATAC_SpleenThymus.T90_b17_Thymus_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL230_b17_ATAC_SpleenThymus.T90_b17_Thymus_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL230_b17_ATAC_SpleenThymus.T165_b17_Spleen_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL230_b17_ATAC_SpleenThymus.T165_b17_Spleen_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL262_b16_ATAC_AdrenalThyroidSpleen.T176_b16_Thyroid_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL262_b16_ATAC_AdrenalThyroidSpleen.T176_b16_Thyroid_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL262_b16_ATAC_AdrenalThyroidSpleen.T273_b16_Adr_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL262_b16_ATAC_AdrenalThyroidSpleen.T273_b16_Adr_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL262_b16_ATAC_AdrenalThyroidSpleen.T314_b16_Spleen_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL262_b16_ATAC_AdrenalThyroidSpleen.T314_b16_Spleen_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL262_b16_ATAC_AdrenalThyroidSpleen.T318_b16_Adr_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL262_b16_ATAC_AdrenalThyroidSpleen.T318_b16_Adr_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL262_b16_ATAC_AdrenalThyroidSpleen.T390_b16_Adr_PCW13.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL262_b16_ATAC_AdrenalThyroidSpleen.T390_b16_Adr_PCW13.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL262_b16_ATAC_AdrenalThyroidSpleen.T40_b16_Adr_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL262_b16_ATAC_AdrenalThyroidSpleen.T40_b16_Adr_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL262_b16_ATAC_AdrenalThyroidSpleen.T136_b16_Thyroid_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL262_b16_ATAC_AdrenalThyroidSpleen.T136_b16_Thyroid_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL211_b15_ATAC_LiverRedo.T235_b15_Liver_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL211_b15_ATAC_LiverRedo.T235_b15_Liver_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL211_b15_ATAC_LiverRedo.T275_b15_Liver_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL211_b15_ATAC_LiverRedo.T275_b15_Liver_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL211_b15_ATAC_LiverRedo.T350_b15_Liver_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL211_b15_ATAC_LiverRedo.T350_b15_Liver_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL211_b15_ATAC_LiverRedo.T375_b15_Liver_PCW15.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL211_b15_ATAC_LiverRedo.T375_b15_Liver_PCW15.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL211_b15_ATAC_LiverRedo.T398_b15_Liver_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL211_b15_ATAC_LiverRedo.T398_b15_Liver_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL211_b15_ATAC_LiverRedo.T71_b15_Liver_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL211_b15_ATAC_LiverRedo.T71_b15_Liver_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL211_b15_ATAC_LiverRedo.T166_b15_Liver_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL211_b15_ATAC_LiverRedo.T166_b15_Liver_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL187_b14_ATAC_Skin.T11_b14_Skin_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL187_b14_ATAC_Skin.T11_b14_Skin_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL187_b14_ATAC_Skin.T178_b14_Skin_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL187_b14_ATAC_Skin.T178_b14_Skin_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL187_b14_ATAC_Skin.T187_b14_Skin_PCW23.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL187_b14_ATAC_Skin.T187_b14_Skin_PCW23.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL187_b14_ATAC_Skin.T408S_b14_Skin_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL187_b14_ATAC_Skin.T408S_b14_Skin_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL187_b14_ATAC_Skin.T45_b14_Skin_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL187_b14_ATAC_Skin.T45_b14_Skin_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL187_b14_ATAC_Skin.T60_b14_Skin_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL187_b14_ATAC_Skin.T60_b14_Skin_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL187_b14_ATAC_Skin.T85_b14_Skin_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL187_b14_ATAC_Skin.T85_b14_Skin_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL187_b14_ATAC_Skin.T109_b14_Skin_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL187_b14_ATAC_Skin.T109_b14_Skin_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL182_b13_ATAC_EyeRedo.T180_b13_Eye_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL182_b13_ATAC_EyeRedo.T180_b13_Eye_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL182_b13_ATAC_EyeRedo.T186_b13_Eye_PCW23.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL182_b13_ATAC_EyeRedo.T186_b13_Eye_PCW23.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL182_b13_ATAC_EyeRedo.T410_b13_Eye_PCW13.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL182_b13_ATAC_EyeRedo.T410_b13_Eye_PCW13.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL182_b13_ATAC_EyeRedo.T51_b13_Eye_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL182_b13_ATAC_EyeRedo.T51_b13_Eye_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL182_b13_ATAC_EyeRedo.T5_b13_Eye_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL182_b13_ATAC_EyeRedo.T5_b13_Eye_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL182_b13_ATAC_EyeRedo.T79_b13_Eye_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL182_b13_ATAC_EyeRedo.T79_b13_Eye_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL182_b13_ATAC_EyeRedo.T106_b13_Eye_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL182_b13_ATAC_EyeRedo.T106_b13_Eye_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL122_b10_ATAC_StomachEsophagus.T269_b10_Stomach_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL122_b10_ATAC_StomachEsophagus.T269_b10_Stomach_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL122_b10_ATAC_StomachEsophagus.T303_b10_Esophagus_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL122_b10_ATAC_StomachEsophagus.T303_b10_Esophagus_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL122_b10_ATAC_StomachEsophagus.T322_b10_Stomach_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL122_b10_ATAC_StomachEsophagus.T322_b10_Stomach_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL122_b10_ATAC_StomachEsophagus.T35_b10_Stomach_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL122_b10_ATAC_StomachEsophagus.T35_b10_Stomach_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL122_b10_ATAC_StomachEsophagus.T399_b10_Stomach_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL122_b10_ATAC_StomachEsophagus.T399_b10_Stomach_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL122_b10_ATAC_StomachEsophagus.T53_b10_Stomach_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL122_b10_ATAC_StomachEsophagus.T53_b10_Stomach_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL122_b10_ATAC_StomachEsophagus.T238_b10_Stomach_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL122_b10_ATAC_StomachEsophagus.T238_b10_Stomach_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL118_b9_ATAC_muscle.T123_b9_Muscle_PCW22.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL118_b9_ATAC_muscle.T123_b9_Muscle_PCW22.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL118_b9_ATAC_muscle.T161_b9_Muscle_PCW10.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL118_b9_ATAC_muscle.T161_b9_Muscle_PCW10.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL118_b9_ATAC_muscle.T377_b9_Muscle_PCW15.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL118_b9_ATAC_muscle.T377_b9_Muscle_PCW15.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL118_b9_ATAC_muscle.T44_b9_Muscle_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL118_b9_ATAC_muscle.T44_b9_Muscle_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL118_b9_ATAC_muscle.T61_b9_Muscle_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL118_b9_ATAC_muscle.T61_b9_Muscle_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL118_b9_ATAC_muscle.T87_b9_Muscle_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL118_b9_ATAC_muscle.T87_b9_Muscle_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL118_b9_ATAC_muscle.T96_b9_Muscle_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL118_b9_ATAC_muscle.T96_b9_Muscle_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/empiricalCDF.py SL118_b9_ATAC_muscle.T10_b9_Muscle_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL118_b9_ATAC_muscle.T10_b9_Muscle_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_eCDF -totalSteps 500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL230_b17_ATAC_SpleenThymus.T233_b17_Thymus_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL230_b17_ATAC_SpleenThymus.T233_b17_Thymus_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL230_b17_ATAC_SpleenThymus.T23_b17_Thymus_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL230_b17_ATAC_SpleenThymus.T23_b17_Thymus_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL230_b17_ATAC_SpleenThymus.T270_b17_Spleen_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL230_b17_ATAC_SpleenThymus.T270_b17_Spleen_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL230_b17_ATAC_SpleenThymus.T314_b17_Spleen_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL230_b17_ATAC_SpleenThymus.T314_b17_Spleen_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL230_b17_ATAC_SpleenThymus.T406_b17_Thymus_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL230_b17_ATAC_SpleenThymus.T406_b17_Thymus_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL230_b17_ATAC_SpleenThymus.T88_b17_Spleen_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL230_b17_ATAC_SpleenThymus.T88_b17_Spleen_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL230_b17_ATAC_SpleenThymus.T90_b17_Thymus_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL230_b17_ATAC_SpleenThymus.T90_b17_Thymus_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL230_b17_ATAC_SpleenThymus.T165_b17_Spleen_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL230_b17_ATAC_SpleenThymus.T165_b17_Spleen_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL262_b16_ATAC_AdrenalThyroidSpleen.T176_b16_Thyroid_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL262_b16_ATAC_AdrenalThyroidSpleen.T176_b16_Thyroid_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL262_b16_ATAC_AdrenalThyroidSpleen.T273_b16_Adr_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL262_b16_ATAC_AdrenalThyroidSpleen.T273_b16_Adr_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL262_b16_ATAC_AdrenalThyroidSpleen.T314_b16_Spleen_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL262_b16_ATAC_AdrenalThyroidSpleen.T314_b16_Spleen_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL262_b16_ATAC_AdrenalThyroidSpleen.T318_b16_Adr_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL262_b16_ATAC_AdrenalThyroidSpleen.T318_b16_Adr_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL262_b16_ATAC_AdrenalThyroidSpleen.T390_b16_Adr_PCW13.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL262_b16_ATAC_AdrenalThyroidSpleen.T390_b16_Adr_PCW13.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL262_b16_ATAC_AdrenalThyroidSpleen.T40_b16_Adr_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL262_b16_ATAC_AdrenalThyroidSpleen.T40_b16_Adr_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL262_b16_ATAC_AdrenalThyroidSpleen.T136_b16_Thyroid_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL262_b16_ATAC_AdrenalThyroidSpleen.T136_b16_Thyroid_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL211_b15_ATAC_LiverRedo.T235_b15_Liver_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL211_b15_ATAC_LiverRedo.T235_b15_Liver_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL211_b15_ATAC_LiverRedo.T275_b15_Liver_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL211_b15_ATAC_LiverRedo.T275_b15_Liver_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL211_b15_ATAC_LiverRedo.T350_b15_Liver_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL211_b15_ATAC_LiverRedo.T350_b15_Liver_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL211_b15_ATAC_LiverRedo.T375_b15_Liver_PCW15.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL211_b15_ATAC_LiverRedo.T375_b15_Liver_PCW15.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL211_b15_ATAC_LiverRedo.T398_b15_Liver_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL211_b15_ATAC_LiverRedo.T398_b15_Liver_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL211_b15_ATAC_LiverRedo.T71_b15_Liver_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL211_b15_ATAC_LiverRedo.T71_b15_Liver_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL211_b15_ATAC_LiverRedo.T166_b15_Liver_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL211_b15_ATAC_LiverRedo.T166_b15_Liver_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL187_b14_ATAC_Skin.T11_b14_Skin_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL187_b14_ATAC_Skin.T11_b14_Skin_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL187_b14_ATAC_Skin.T178_b14_Skin_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL187_b14_ATAC_Skin.T178_b14_Skin_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL187_b14_ATAC_Skin.T187_b14_Skin_PCW23.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL187_b14_ATAC_Skin.T187_b14_Skin_PCW23.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL187_b14_ATAC_Skin.T408S_b14_Skin_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL187_b14_ATAC_Skin.T408S_b14_Skin_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL187_b14_ATAC_Skin.T45_b14_Skin_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL187_b14_ATAC_Skin.T45_b14_Skin_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL187_b14_ATAC_Skin.T60_b14_Skin_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL187_b14_ATAC_Skin.T60_b14_Skin_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL187_b14_ATAC_Skin.T85_b14_Skin_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL187_b14_ATAC_Skin.T85_b14_Skin_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL187_b14_ATAC_Skin.T109_b14_Skin_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL187_b14_ATAC_Skin.T109_b14_Skin_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL182_b13_ATAC_EyeRedo.T180_b13_Eye_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL182_b13_ATAC_EyeRedo.T180_b13_Eye_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL182_b13_ATAC_EyeRedo.T186_b13_Eye_PCW23.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL182_b13_ATAC_EyeRedo.T186_b13_Eye_PCW23.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL182_b13_ATAC_EyeRedo.T410_b13_Eye_PCW13.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL182_b13_ATAC_EyeRedo.T410_b13_Eye_PCW13.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL182_b13_ATAC_EyeRedo.T51_b13_Eye_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL182_b13_ATAC_EyeRedo.T51_b13_Eye_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL182_b13_ATAC_EyeRedo.T5_b13_Eye_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL182_b13_ATAC_EyeRedo.T5_b13_Eye_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL182_b13_ATAC_EyeRedo.T79_b13_Eye_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL182_b13_ATAC_EyeRedo.T79_b13_Eye_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL182_b13_ATAC_EyeRedo.T106_b13_Eye_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL182_b13_ATAC_EyeRedo.T106_b13_Eye_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL122_b10_ATAC_StomachEsophagus.T269_b10_Stomach_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL122_b10_ATAC_StomachEsophagus.T269_b10_Stomach_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL122_b10_ATAC_StomachEsophagus.T303_b10_Esophagus_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL122_b10_ATAC_StomachEsophagus.T303_b10_Esophagus_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL122_b10_ATAC_StomachEsophagus.T322_b10_Stomach_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL122_b10_ATAC_StomachEsophagus.T322_b10_Stomach_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL122_b10_ATAC_StomachEsophagus.T35_b10_Stomach_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL122_b10_ATAC_StomachEsophagus.T35_b10_Stomach_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL122_b10_ATAC_StomachEsophagus.T399_b10_Stomach_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL122_b10_ATAC_StomachEsophagus.T399_b10_Stomach_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL122_b10_ATAC_StomachEsophagus.T53_b10_Stomach_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL122_b10_ATAC_StomachEsophagus.T53_b10_Stomach_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL122_b10_ATAC_StomachEsophagus.T238_b10_Stomach_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL122_b10_ATAC_StomachEsophagus.T238_b10_Stomach_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL118_b9_ATAC_muscle.T123_b9_Muscle_PCW22.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL118_b9_ATAC_muscle.T123_b9_Muscle_PCW22.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL118_b9_ATAC_muscle.T161_b9_Muscle_PCW10.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL118_b9_ATAC_muscle.T161_b9_Muscle_PCW10.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL118_b9_ATAC_muscle.T377_b9_Muscle_PCW15.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL118_b9_ATAC_muscle.T377_b9_Muscle_PCW15.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL118_b9_ATAC_muscle.T44_b9_Muscle_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL118_b9_ATAC_muscle.T44_b9_Muscle_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL118_b9_ATAC_muscle.T61_b9_Muscle_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL118_b9_ATAC_muscle.T61_b9_Muscle_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL118_b9_ATAC_muscle.T87_b9_Muscle_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL118_b9_ATAC_muscle.T87_b9_Muscle_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL118_b9_ATAC_muscle.T96_b9_Muscle_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL118_b9_ATAC_muscle.T96_b9_Muscle_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/extractLinesByValue.py SL118_b9_ATAC_muscle.T10_b9_Muscle_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 500 Inf SL118_b9_ATAC_muscle.T10_b9_Muscle_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.min500 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL230_b17_ATAC_SpleenThymus.T233_b17_Thymus_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL230_b17_ATAC_SpleenThymus.T233_b17_Thymus_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL230_b17_ATAC_SpleenThymus.T23_b17_Thymus_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL230_b17_ATAC_SpleenThymus.T23_b17_Thymus_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL230_b17_ATAC_SpleenThymus.T270_b17_Spleen_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL230_b17_ATAC_SpleenThymus.T270_b17_Spleen_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL230_b17_ATAC_SpleenThymus.T314_b17_Spleen_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL230_b17_ATAC_SpleenThymus.T314_b17_Spleen_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL230_b17_ATAC_SpleenThymus.T406_b17_Thymus_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL230_b17_ATAC_SpleenThymus.T406_b17_Thymus_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL230_b17_ATAC_SpleenThymus.T88_b17_Spleen_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL230_b17_ATAC_SpleenThymus.T88_b17_Spleen_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL230_b17_ATAC_SpleenThymus.T90_b17_Thymus_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL230_b17_ATAC_SpleenThymus.T90_b17_Thymus_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL230_b17_ATAC_SpleenThymus.T165_b17_Spleen_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL230_b17_ATAC_SpleenThymus.T165_b17_Spleen_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL262_b16_ATAC_AdrenalThyroidSpleen.T176_b16_Thyroid_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL262_b16_ATAC_AdrenalThyroidSpleen.T176_b16_Thyroid_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL262_b16_ATAC_AdrenalThyroidSpleen.T273_b16_Adr_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL262_b16_ATAC_AdrenalThyroidSpleen.T273_b16_Adr_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL262_b16_ATAC_AdrenalThyroidSpleen.T314_b16_Spleen_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL262_b16_ATAC_AdrenalThyroidSpleen.T314_b16_Spleen_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL262_b16_ATAC_AdrenalThyroidSpleen.T318_b16_Adr_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL262_b16_ATAC_AdrenalThyroidSpleen.T318_b16_Adr_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL262_b16_ATAC_AdrenalThyroidSpleen.T390_b16_Adr_PCW13.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL262_b16_ATAC_AdrenalThyroidSpleen.T390_b16_Adr_PCW13.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL262_b16_ATAC_AdrenalThyroidSpleen.T40_b16_Adr_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL262_b16_ATAC_AdrenalThyroidSpleen.T40_b16_Adr_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL262_b16_ATAC_AdrenalThyroidSpleen.T136_b16_Thyroid_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL262_b16_ATAC_AdrenalThyroidSpleen.T136_b16_Thyroid_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL211_b15_ATAC_LiverRedo.T235_b15_Liver_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL211_b15_ATAC_LiverRedo.T235_b15_Liver_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL211_b15_ATAC_LiverRedo.T275_b15_Liver_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL211_b15_ATAC_LiverRedo.T275_b15_Liver_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL211_b15_ATAC_LiverRedo.T350_b15_Liver_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL211_b15_ATAC_LiverRedo.T350_b15_Liver_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL211_b15_ATAC_LiverRedo.T375_b15_Liver_PCW15.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL211_b15_ATAC_LiverRedo.T375_b15_Liver_PCW15.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL211_b15_ATAC_LiverRedo.T398_b15_Liver_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL211_b15_ATAC_LiverRedo.T398_b15_Liver_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL211_b15_ATAC_LiverRedo.T71_b15_Liver_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL211_b15_ATAC_LiverRedo.T71_b15_Liver_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL211_b15_ATAC_LiverRedo.T166_b15_Liver_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL211_b15_ATAC_LiverRedo.T166_b15_Liver_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL187_b14_ATAC_Skin.T11_b14_Skin_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL187_b14_ATAC_Skin.T11_b14_Skin_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL187_b14_ATAC_Skin.T178_b14_Skin_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL187_b14_ATAC_Skin.T178_b14_Skin_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL187_b14_ATAC_Skin.T187_b14_Skin_PCW23.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL187_b14_ATAC_Skin.T187_b14_Skin_PCW23.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL187_b14_ATAC_Skin.T408S_b14_Skin_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL187_b14_ATAC_Skin.T408S_b14_Skin_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL187_b14_ATAC_Skin.T45_b14_Skin_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL187_b14_ATAC_Skin.T45_b14_Skin_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL187_b14_ATAC_Skin.T60_b14_Skin_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL187_b14_ATAC_Skin.T60_b14_Skin_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL187_b14_ATAC_Skin.T85_b14_Skin_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL187_b14_ATAC_Skin.T85_b14_Skin_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL187_b14_ATAC_Skin.T109_b14_Skin_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL187_b14_ATAC_Skin.T109_b14_Skin_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL182_b13_ATAC_EyeRedo.T180_b13_Eye_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL182_b13_ATAC_EyeRedo.T180_b13_Eye_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL182_b13_ATAC_EyeRedo.T186_b13_Eye_PCW23.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL182_b13_ATAC_EyeRedo.T186_b13_Eye_PCW23.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL182_b13_ATAC_EyeRedo.T410_b13_Eye_PCW13.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL182_b13_ATAC_EyeRedo.T410_b13_Eye_PCW13.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL182_b13_ATAC_EyeRedo.T51_b13_Eye_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL182_b13_ATAC_EyeRedo.T51_b13_Eye_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL182_b13_ATAC_EyeRedo.T5_b13_Eye_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL182_b13_ATAC_EyeRedo.T5_b13_Eye_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL182_b13_ATAC_EyeRedo.T79_b13_Eye_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL182_b13_ATAC_EyeRedo.T79_b13_Eye_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL182_b13_ATAC_EyeRedo.T106_b13_Eye_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL182_b13_ATAC_EyeRedo.T106_b13_Eye_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL122_b10_ATAC_StomachEsophagus.T269_b10_Stomach_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL122_b10_ATAC_StomachEsophagus.T269_b10_Stomach_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL122_b10_ATAC_StomachEsophagus.T303_b10_Esophagus_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL122_b10_ATAC_StomachEsophagus.T303_b10_Esophagus_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL122_b10_ATAC_StomachEsophagus.T322_b10_Stomach_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL122_b10_ATAC_StomachEsophagus.T322_b10_Stomach_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL122_b10_ATAC_StomachEsophagus.T35_b10_Stomach_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL122_b10_ATAC_StomachEsophagus.T35_b10_Stomach_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL122_b10_ATAC_StomachEsophagus.T399_b10_Stomach_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL122_b10_ATAC_StomachEsophagus.T399_b10_Stomach_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL122_b10_ATAC_StomachEsophagus.T53_b10_Stomach_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL122_b10_ATAC_StomachEsophagus.T53_b10_Stomach_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL122_b10_ATAC_StomachEsophagus.T238_b10_Stomach_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL122_b10_ATAC_StomachEsophagus.T238_b10_Stomach_PCW21.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL118_b9_ATAC_muscle.T123_b9_Muscle_PCW22.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL118_b9_ATAC_muscle.T123_b9_Muscle_PCW22.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL118_b9_ATAC_muscle.T161_b9_Muscle_PCW10.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL118_b9_ATAC_muscle.T161_b9_Muscle_PCW10.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL118_b9_ATAC_muscle.T377_b9_Muscle_PCW15.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL118_b9_ATAC_muscle.T377_b9_Muscle_PCW15.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL118_b9_ATAC_muscle.T44_b9_Muscle_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL118_b9_ATAC_muscle.T44_b9_Muscle_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL118_b9_ATAC_muscle.T61_b9_Muscle_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL118_b9_ATAC_muscle.T61_b9_Muscle_PCW20.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL118_b9_ATAC_muscle.T87_b9_Muscle_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL118_b9_ATAC_muscle.T87_b9_Muscle_PCW18.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL118_b9_ATAC_muscle.T96_b9_Muscle_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL118_b9_ATAC_muscle.T96_b9_Muscle_PCW17.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &
python /oak/stanford/groups/akundaje/marinovg/code/makehistogram.py SL118_b9_ATAC_muscle.T10_b9_Muscle_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats 1 SL118_b9_ATAC_muscle.T10_b9_Muscle_PCW19.2x36mers.hg38.unique.BC_dedup.per_cell_stats.fragments_hist -specificbins 0,10,100,500,1000,5000,10000 &