# Parameters
data_name = "Zic1"
task_idxs = "0-213,216-278"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
overwrite = False

from matlas.reports import collect_motifDB_to_be_displayed, display_comparative_cell_types

load data from labcluster

Using TensorFlow backend.
2019-08-23 11:52:58,453 [WARNING] git-lfs not installed

homer_matches, modisco_matches = collect_motifDB_to_be_displayed(task_idxs, homer_root, modisco_root, 
                                                              overwrite=False)

TF-MoDISco is using the TensorFlow backend.

display_comparative_cell_types(data_name, homer_matches, modisco_matches)

Cell type	Modisco	Homer
wES;5th_Rhmbmr;E8.5;A;GEO	Pattern: metacluster_0/pattern_19 Significance: 0.0119285	Absent
wES;posterior;2;E9.5;A;GEO	Pattern: metacluster_0/pattern_10 Significance: 0.0028026	Absent
wES;posterior;1;E8.5;A;GEO	Pattern: metacluster_0/pattern_14 Significance: 0.034730300000000006	Absent
npES;posterior_delA;E8.5;A;GEO	Pattern: metacluster_0/pattern_15 Significance: 0.034069800000000004	Absent
ES;v6.5;A;GEO	Pattern: metacluster_1/pattern_10 Significance: 0.036339800000000005	Absent
npES;posterior_delC;E8.5;A;GEO	Pattern: metacluster_0/pattern_4 Significance: 0.039755900000000004	Absent
ES;ZhBTc4;2;D;GEO	Pattern: metacluster_1/pattern_9 Significance: 0.0419894	Absent
wES;FaceP;E14.5;D;En	Pattern: metacluster_0/pattern_5 Significance: 0.0357808	Absent
G_NRN_P;A;GEO	Pattern: metacluster_1/pattern_16 Significance: 0.0346722	Absent
ENDRM_ESD;A;GEO	Pattern: metacluster_1/pattern_2 Significance: 0.00687765	Absent
Hnd_BRN;P0;D;En	Pattern: metacluster_1/pattern_15 Significance: 0.0501298	Absent
npES;ZHBTC4;doxyc;treat;A;GEO	Pattern: metacluster_0/pattern_17 Significance: 0.040897	Absent
wES;3rd_Rhmbmr;E8.5;A;GEO	Pattern: metacluster_0/pattern_8 Significance: 0.0191055	Absent