# Parameters
data_name = "Tfap2a"
task_idxs = "0-213,216-278"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
overwrite = False

from matlas.reports import collect_motifDB_to_be_displayed, display_comparative_cell_types

load data from labcluster

Using TensorFlow backend.
2019-08-23 11:43:57,076 [WARNING] git-lfs not installed

homer_matches, modisco_matches = collect_motifDB_to_be_displayed(task_idxs, homer_root, modisco_root, 
                                                              overwrite=False)

TF-MoDISco is using the TensorFlow backend.

display_comparative_cell_types(data_name, homer_matches, modisco_matches)

Tfap2a: Motif: M08704_2.00

Forward PWM

Reverse PWM

Shared Cell types both TF-MoDISco and Homer finds Tfap2a: #1

Cell type	Modisco	Homer
Adipose;D;En	Pattern: metacluster_0/pattern_3 Significance: 0.0025265	Pattern: motif10.motif Significance: 0.056338099999999995

Unique Cell types only TF-MoDISco finds Tfap2a: #23

Cell type	Modisco	Homer
wES;Fr_lmb;E11.5;D;En	Pattern: metacluster_1/pattern_21 Significance: 0.0211165	Absent
wES;Hnd_lmb;E11.5;D;En	Pattern: metacluster_0/pattern_25 Significance: 0.00188154	Absent
wES;FaceP;E11.5;D;En	Pattern: metacluster_1/pattern_19 Significance: 0.053124300000000006	Absent
ES;ZhBTc4;1;D;GEO	Pattern: metacluster_1/pattern_3 Significance: 0.01132	Absent
ES;ZhBTc4;2;D;GEO	Pattern: metacluster_1/pattern_21 Significance: 0.0427974	Absent
A20;B-lymphoma;D;En	Pattern: metacluster_1/pattern_11 Significance: 0.056353	Absent
CH12_QNTPLE;A;CL	Pattern: metacluster_1/pattern_15 Significance: 0.042958699999999996	Absent
wES;3rd_Rhmbmr;E8.5;A;GEO	Pattern: metacluster_0/pattern_11 Significance: 0.0566852	Absent
npES;3rd_Rhmbmr_delC;E8.5;A;GEO	Pattern: metacluster_0/pattern_11 Significance: 0.052162099999999996	Absent
3T3-L1;FBRBLST;D;En	Pattern: metacluster_1/pattern_21 Significance: 0.0528721	Absent
largeDPprecrsr;CD4+CD8+CD69-;A;CL	Pattern: metacluster_1/pattern_10 Significance: 0.0232373	Absent
npES;5th_Rhmbmr_delA;E8.5;A;GEO	Pattern: metacluster_0/pattern_13 Significance: 0.0364653	Absent
npES;posterior_delA;E8.5;A;GEO	Pattern: metacluster_0/pattern_21 Significance: 0.0335063	Absent
SKN_EPTHL;A;GEO	Pattern: metacluster_0/pattern_8 Significance: 0.00743869	Absent
BCK_SKN;A;GEO	Pattern: metacluster_0/pattern_12 Significance: 0.0473654	Absent
Mammary_GLND;A;GEO	Pattern: metacluster_1/pattern_17 Significance: 0.0328778	Absent
RTN;D1;D;En	Pattern: metacluster_0/pattern_20 Significance: 0.00368479	Absent
naiveT;CD8+;A;GEO	Pattern: metacluster_1/pattern_2 Significance: 0.0458466	Absent
npES;ZHBTC4;doxyc;treat;A;GEO	Pattern: metacluster_0/pattern_6 Significance: 0.0017469	Absent
wES;WHL_BRN;E14.5;D;En	Pattern: metacluster_1/pattern_20 Significance: 0.0596831	Absent
Mammary_BptfKO;A;GEO	Pattern: metacluster_0/pattern_22 Significance: 0.050401999999999995 / Pattern: metacluster_0/pattern_23 Significance: 0.038777099999999995	Absent
placenta;A;CL	Pattern: metacluster_0/pattern_7 Significance: 0.00509144	Absent
SPNL_CHRD;A;CL	Pattern: metacluster_1/pattern_9 Significance: 0.0426438	Absent

No Cell types only Homer finds Tfap2a