# Parameters
data_name = "Stat6"
task_idxs = "0-213,216-278"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
overwrite = False

from matlas.reports import collect_motifDB_to_be_displayed, display_comparative_cell_types

load data from labcluster

Using TensorFlow backend.
2019-08-23 11:40:49,071 [WARNING] git-lfs not installed

homer_matches, modisco_matches = collect_motifDB_to_be_displayed(task_idxs, homer_root, modisco_root, 
                                                              overwrite=False)

TF-MoDISco is using the TensorFlow backend.

display_comparative_cell_types(data_name, homer_matches, modisco_matches)

Stat6: Motif: M08173_2.00

Forward PWM

Reverse PWM

No Cell types that both TF-MoDISco and Homer finds Stat6

Unique Cell types only TF-MoDISco finds Stat6: #18

Cell type	Modisco	Homer
memT;CD4+;A;CL	Pattern: metacluster_1/pattern_1 Significance: 0.05861330000000001	Absent
memT_tmrD_lstr;TCR_SV40-I_CD8+;D7;A;GEO	Pattern: metacluster_1/pattern_1 Significance: 0.051230700000000004	Absent
ES;ZhBTc4;1;D;GEO	Pattern: metacluster_1/pattern_4 Significance: 0.0437501	Absent
ES;D0;D;GEO	Pattern: metacluster_0/pattern_4 Significance: 0.05998150000000001	Absent
T_SPLND_blstCLTRD;CD4+;D;GEO	Pattern: metacluster_1/pattern_0 Significance: 0.039813999999999995	Absent
Mast;A;CL	Pattern: metacluster_0/pattern_20 Significance: 0.029533799999999995	Absent
BSPHL;A;CL	Pattern: metacluster_1/pattern_19 Significance: 0.0249391	Absent
aNonTfh;A;CL	Pattern: metacluster_1/pattern_0 Significance: 0.05184400000000001	Absent
KDNY;P0;D;En	Pattern: metacluster_1/pattern_2 Significance: 0.0558276	Absent
wES;5th_Rhmbmr;E8.5;A;GEO	Pattern: metacluster_0/pattern_10 Significance: 0.046800699999999994	Absent
Mammary_GLND;A;GEO	Pattern: metacluster_1/pattern_12 Significance: 0.0474589	Absent
wES.CRNL_NRL_CRST;E10.5;A;GEO	Pattern: metacluster_0/pattern_3 Significance: 0.05659159999999999	Absent
ILC3;A;GEO	Pattern: metacluster_1/pattern_0 Significance: 0.059917	Absent
ILC1_AbxGRMFree;A;GEO	Pattern: metacluster_1/pattern_0 Significance: 0.055568200000000005	Absent
T_LCMV;CD8+;D33;A;GEO	Pattern: metacluster_1/pattern_1 Significance: 0.0458384	Absent
TEff_SPLND;CD8+;A;GEO	Pattern: metacluster_1/pattern_0 Significance: 0.0504866	Absent
npES;ZHBTC4;Brg1fl_fl;untreat;A;GEO	Pattern: metacluster_1/pattern_8 Significance: 0.05027519999999999	Absent
Mammary_BptfKO;A;GEO	Pattern: metacluster_0/pattern_4 Significance: 0.0393142	Absent

No Cell types only Homer finds Stat6