# Parameters
data_name = "Sox15"
task_idxs = "0-213,216-278"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
overwrite = False

from matlas.reports import collect_motifDB_to_be_displayed, display_comparative_cell_types

load data from labcluster

Using TensorFlow backend.
2019-08-23 11:35:29,252 [WARNING] git-lfs not installed

homer_matches, modisco_matches = collect_motifDB_to_be_displayed(task_idxs, homer_root, modisco_root, 
                                                              overwrite=False)

TF-MoDISco is using the TensorFlow backend.

display_comparative_cell_types(data_name, homer_matches, modisco_matches)

Sox15: Motif: M00202_2.00

Forward PWM

Reverse PWM

Shared Cell types both TF-MoDISco and Homer finds Sox15: #1

Cell type	Modisco	Homer
ENDRM_ESD;A;GEO	Pattern: metacluster_1/pattern_5 Significance: 0.012367399999999999	Pattern: motif9.motif Significance: 0.016260399999999998

Unique Cell types only TF-MoDISco finds Sox15: #5

Cell type	Modisco	Homer
ES;J1;A;CL	Pattern: metacluster_1/pattern_4 Significance: 0.023335400000000003	Absent
ES;F1216;A;GEO	Pattern: metacluster_0/pattern_7 Significance: 0.0402483	Absent
iVIP_NRN;A;GEO	Pattern: metacluster_1/pattern_18 Significance: 0.0434999	Absent
ES;E14;A;CL	Pattern: metacluster_1/pattern_3 Significance: 0.052532	Absent
ES;JM8.N4;Asynch;A;GEO	Pattern: metacluster_0/pattern_10 Significance: 0.050375199999999995	Absent

No Cell types only Homer finds Sox15