# Parameters
data_name = "Hes5"
task_idxs = "0-213,216-278"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
overwrite = False

from matlas.reports import collect_motifDB_to_be_displayed, display_comparative_cell_types

load data from labcluster

Using TensorFlow backend.
2019-08-23 11:11:01,251 [WARNING] git-lfs not installed

homer_matches, modisco_matches = collect_motifDB_to_be_displayed(task_idxs, homer_root, modisco_root, 
                                                              overwrite=False)

TF-MoDISco is using the TensorFlow backend.

display_comparative_cell_types(data_name, homer_matches, modisco_matches)

Hes5: Motif: M01747_2.00

Forward PWM

Reverse PWM

No Cell types that both TF-MoDISco and Homer finds Hes5

Unique Cell types only TF-MoDISco finds Hes5: #11

Cell type	Modisco	Homer
largeDPprecrsr;CD4+CD8+CD69-;A;CL	Pattern: metacluster_1/pattern_5 Significance: 0.0192541	Absent
smallDPprecrsor;CD4+CD8+CD69-;A;CL	Pattern: metacluster_1/pattern_4 Significance: 0.0203317	Absent
LNG;8wks;D;En	Pattern: metacluster_0/pattern_11 Significance: 0.0512319	Absent
proB;A;CL	Pattern: metacluster_1/pattern_3 Significance: 0.0515431	Absent
plasmaB;A;CL	Pattern: metacluster_1/pattern_5 Significance: 0.0235673	Absent
preB_BMD;A;GEO	Pattern: metacluster_1/pattern_5 Significance: 0.0318566	Absent
DP;A;CL	Pattern: metacluster_1/pattern_10 Significance: 0.013592600000000002	Absent
B;B220_CD43;A;GEO	Pattern: metacluster_1/pattern_9 Significance: 0.0433085	Absent
DP3b;A;CL	Pattern: metacluster_1/pattern_3 Significance: 0.029129900000000004	Absent
WHL_BRN;8wks;D;En	Pattern: metacluster_1/pattern_13 Significance: 0.0505515	Absent
KDNY;8wks;D;En	Pattern: metacluster_1/pattern_7 Significance: 0.0499492	Absent

Unique Cell types only Homer finds Hes5: #8

Cell type	Modisco	Homer
ES;F1216;A;GEO	Absent	Pattern: motif19.motif Significance: 0.0458671
wES;posterior;1;E8.5;A;GEO	Absent	Pattern: motif13.motif Significance: 0.046325
DC;A;En	Absent	Pattern: motif13.motif Significance: 0.0565544
A20;B-lymphoma;D;En	Absent	Pattern: motif13.motif Significance: 0.0583479
DP3a;A;CL	Absent	Pattern: motif12.motif Significance: 0.0311707
DC_LPS;6h;A;GEO	Absent	Pattern: motif12.motif Significance: 0.0487449
Hnd_BRN;P0;D;En	Absent	Pattern: motif16.motif Significance: 0.042670599999999996
Heart;D;En	Absent	Pattern: motif14.motif Significance: 0.04995