In [1]:
# Parameters
data_name = "DP;A;CL"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
tomtom_report_root = "http://mitra.stanford.edu/kundaje/msharmin/report/tomtom_outs/cells"
task_dir = "task_46-naivegw"
perf_file = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/fineFactorized/task_46-naivegw/NaiveauPRC.txt"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
reportfile = "/mnt/lab_data/kundaje/msharmin/annotations/filtering samples_MS2.xlsx"
sheetname = "filter23"
In [2]:
from matlas.reports import display_metadata
load data from labcluster
Using TensorFlow backend.
2019-08-30 18:50:25,063 [WARNING] git-lfs not installed
In [3]:
display_metadata(data_name, perf_file, reportfile, sheetname)
    Sample Information
    MetaData NameDescription
    Cell typeDP
    Cell GroupT cells
    Experiment NameATAC
    Experiment GroupCasellas Lab
    Pipeline Output
    replicateNaïve overlap peaksIDR peaksTSS enrichment (< 8 is very poor <10 is low)Final number of unique mapping, dup-filtered, chrM filtered readsNumber of reads in called peak regionsFraction of reads in called peak regionsNumber of reads in promoter regionsFraction of reads in promoter regionsNumber of reads in enhancer regionsFraction of reads in enhancer regions
    rep113052310745613.180951321601122433110.238775572850.1473175510610.3421
    Modelling Metadata
    MetricValue
    auPRC0.583
    Calibrated Recall at 50% FDR0.217
    Number of Positive Examples in Test Data109973
    Number of Negative Examples in Test Data7960878
    Imbalance Ratio in Test Data0.0136
    Test Chromosomeschr2, chr3, chr19
In [4]:
from matlas.reports import display_paiwise_pattern_comparison
from matlas.reports import display_denovo_patterns
In [5]:
display_denovo_patterns(data_name, modisco_root=modisco_root)
TF-MoDISco is using the TensorFlow backend.
The following two links show list of Denovo Patterns and corresponding Motifs discovered by TF-MoDISco
Click here for Denovo Patterns by TF-MoDISco: #22
Pattern NameTF Name(s)Modisco
metacluster_1/pattern_0 # seqlets: 5789 SequenceContrib ScoresHyp_Contrib Scores
Ets1, Erg, Elk1, Elk4, Fli1, Etv2, Gabpa, Etv4, Etv5, Elk3,

Spi1, Elf1, Elf2, Etv6, Ehf, Fev, Etv1, Etv3, XP_911724.4, Elf3, Spib,

Elf4, Elf5, Stat4, Ets2, Spdef, Spic, Irf8, Irf4
metacluster_1/pattern_1 # seqlets: 5654 SequenceContrib ScoresHyp_Contrib Scores
Ctcf, Ctcfl
metacluster_1/pattern_2 # seqlets: 3707 SequenceContrib ScoresHyp_Contrib Scores
Sp2, Sp3, Sp1, Klf3, Sp4, Sp5, Klf6, Wt1, Klf15, Zbtb17,

Maz, Zfx, Klf1, Egr1, Klf5, Zfp281, Usf2, Egr2, Klf4, Klf7, Mxi1,

E2f4, Rela, Klf12, E2f1, Klf8, Nr1h4, Mbd2, E2f6, E2f3
metacluster_1/pattern_3 # seqlets: 1440 SequenceContrib ScoresHyp_Contrib Scores
Nfyb, Nfyc, Nfya, Foxi1, Pbx3
metacluster_1/pattern_4 # seqlets: 1324 SequenceContrib ScoresHyp_Contrib Scores
Nrf1
metacluster_1/pattern_5 # seqlets: 783 SequenceContrib ScoresHyp_Contrib Scores
Zfp143, Thap11, Tbx2
metacluster_1/pattern_6 # seqlets: 677 SequenceContrib ScoresHyp_Contrib Scores
Irf1, Irf2, Irf7, Prdm1, Stat1, Stat2, Irf3, Batf3, Irf9
metacluster_1/pattern_7 # seqlets: 666 SequenceContrib ScoresHyp_Contrib Scores
Creb1, Atf2, Atf1, Atf7, Crem, Jdp2, Creb5, Atf3, Usf1, Rfx1,

Fosl2
metacluster_1/pattern_8 # seqlets: 659 SequenceContrib ScoresHyp_Contrib Scores
Taf1, Yy1, Zfp42
metacluster_1/pattern_9 # seqlets: 597 SequenceContrib ScoresHyp_Contrib Scores
Tfeb, Tfe3, Arntl, Tfec, Mitf, Clock, Srebf1, Bhlhe40, Arnt, Mlx,

Srebf2, Npas2, Tcfl5, Rxrg, Mycn, Bhlhe41, Rxrb, Creb3l2, Max, Hlf, Myc
metacluster_1/pattern_10 # seqlets: 548 SequenceContrib ScoresHyp_Contrib Scores
Tcf3, Tcf4, Snai2, Tcf12, Myf6, Ascl2, Tcf7l1, Ptf1a, Ascl1, Myog,

Myod1, Mnt, Pknox2, Snai1, Hes5, Meis2, Meis3, Myf5, Nhlh2, Hey2, Figla,

Tal1, Bhlha15, Hes2, Zeb1
metacluster_1/pattern_11 # seqlets: 485 SequenceContrib ScoresHyp_Contrib Scores
Runx1, Runx2, Runx3, Cbfb, Gfi1b
metacluster_1/pattern_12 # seqlets: 289 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_13 # seqlets: 192 SequenceContrib ScoresHyp_Contrib Scores
Zbtb33
metacluster_1/pattern_14 # seqlets: 183 SequenceContrib ScoresHyp_Contrib Scores
Rfx3, Rfx2, Rfx4, Rfx7, Rfx6
metacluster_1/pattern_15 # seqlets: 178 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_16 # seqlets: 124 SequenceContrib ScoresHyp_Contrib Scores
Rorc, Nr1d2, Pparg, Nr1d1
metacluster_1/pattern_17 # seqlets: 102 SequenceContrib ScoresHyp_Contrib Scores
Stat3
metacluster_1/pattern_18 # seqlets: 85 SequenceContrib ScoresHyp_Contrib Scores
Sall4
metacluster_1/pattern_19 # seqlets: 83 SequenceContrib ScoresHyp_Contrib Scores
Mef2a, Mef2d, Mef2c
metacluster_1/pattern_20 # seqlets: 70 SequenceContrib ScoresHyp_Contrib Scores
Mafk, Mafa, Bach2, Fos, Fosl1, Nfe2l2, Jun, Mafb, Jund, Fosb,

Bach1, Junb, Batf, Zic2, Nfe2
metacluster_1/pattern_21 # seqlets: 61 SequenceContrib ScoresHyp_Contrib Scores
Nfib, Nfia, Nfic
Click here for Motifs by TF-MoDISco: #177
TF NamePattern(s)
Ets1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00223337
metacluster_1/pattern_120.0182938
metacluster_1/pattern_180.0363907
Erg
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00236967
metacluster_1/pattern_120.0182938
metacluster_1/pattern_180.052051599999999996
Elk1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00236967
metacluster_1/pattern_120.00784583
metacluster_1/pattern_180.052051599999999996
Elk4
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00281668
metacluster_1/pattern_120.0182938
metacluster_1/pattern_180.0454463
Fli1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00236967
metacluster_1/pattern_20.035363099999999995
metacluster_1/pattern_120.043664499999999995
metacluster_1/pattern_180.0454463
Etv2
Pattern NameModiscoSignificance
metacluster_1/pattern_02.36294e-05
Gabpa
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0023823
metacluster_1/pattern_120.055277099999999996
metacluster_1/pattern_180.0363907
Etv4
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00236967
metacluster_1/pattern_120.048428399999999996
metacluster_1/pattern_180.0252078
Etv5
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00087742
metacluster_1/pattern_120.048428399999999996
metacluster_1/pattern_180.0178352
Elk3
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00236967
metacluster_1/pattern_120.048428399999999996
metacluster_1/pattern_180.034193699999999994
Spi1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.058554300000000004
Elf1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00118975
metacluster_1/pattern_120.043664499999999995
Elf2
Pattern NameModiscoSignificance
metacluster_1/pattern_00.017297099999999996
metacluster_1/pattern_150.0220753
Etv6
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00223337
metacluster_1/pattern_150.05935169999999999
Ehf
Pattern NameModiscoSignificance
metacluster_1/pattern_00.022679400000000002
Fev
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00223337
metacluster_1/pattern_120.0303967
metacluster_1/pattern_180.0363907
Etv1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00248231
metacluster_1/pattern_120.048428399999999996
metacluster_1/pattern_180.025336400000000002
Etv3
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0023823
XP_911724.4
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00255112
Elf3
Pattern NameModiscoSignificance
metacluster_1/pattern_00.043486500000000004
Spib
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00483055
metacluster_1/pattern_60.0139202
Elf4
Pattern NameModiscoSignificance
metacluster_1/pattern_00.010397100000000001
Elf5
Pattern NameModiscoSignificance
metacluster_1/pattern_00.053658000000000004
Stat4
Pattern NameModiscoSignificance
metacluster_1/pattern_00.035203899999999996
metacluster_1/pattern_170.05495830000000001
Ets2
Pattern NameModiscoSignificance
metacluster_1/pattern_00.035203899999999996
Spdef
Pattern NameModiscoSignificance
metacluster_1/pattern_00.035203899999999996
Spic
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0432097
Irf8
Pattern NameModiscoSignificance
metacluster_1/pattern_00.047997500000000005
metacluster_1/pattern_62.2131100000000002e-05
Irf4
Pattern NameModiscoSignificance
metacluster_1/pattern_00.05295130000000001
metacluster_1/pattern_60.0243343
Ctcf
Pattern NameModiscoSignificance
metacluster_1/pattern_13.88751e-09
Ctcfl
Pattern NameModiscoSignificance
metacluster_1/pattern_14.910130000000001e-09
metacluster_1/pattern_20.035363099999999995
Sp2
Pattern NameModiscoSignificance
metacluster_1/pattern_21.2795399999999998e-16
metacluster_1/pattern_40.000572339
metacluster_1/pattern_70.00218369
metacluster_1/pattern_84.66309e-05
metacluster_1/pattern_90.045740499999999996
metacluster_1/pattern_120.043664499999999995
metacluster_1/pattern_130.00729801
metacluster_1/pattern_170.00400695
metacluster_1/pattern_180.000124249
metacluster_1/pattern_200.0137694
Sp3
Pattern NameModiscoSignificance
metacluster_1/pattern_22.4551199999999997e-13
metacluster_1/pattern_40.00242404
metacluster_1/pattern_70.023395
metacluster_1/pattern_80.000507941
metacluster_1/pattern_130.0131762
metacluster_1/pattern_170.010631
metacluster_1/pattern_180.00581856
metacluster_1/pattern_200.0448791
Sp1
Pattern NameModiscoSignificance
metacluster_1/pattern_20.000615076
metacluster_1/pattern_40.0145912
metacluster_1/pattern_70.00148856
metacluster_1/pattern_80.000263053
metacluster_1/pattern_90.035811199999999994
metacluster_1/pattern_120.043664499999999995
metacluster_1/pattern_130.030819599999999996
metacluster_1/pattern_170.023502000000000002
metacluster_1/pattern_180.013485399999999998
metacluster_1/pattern_200.0143263
Klf3
Pattern NameModiscoSignificance
metacluster_1/pattern_23.4935300000000004e-09
metacluster_1/pattern_80.027338799999999996
metacluster_1/pattern_180.013485399999999998
Sp4
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0121098
metacluster_1/pattern_180.048693400000000005
Sp5
Pattern NameModiscoSignificance
metacluster_1/pattern_21.7144999999999998e-06
Klf6
Pattern NameModiscoSignificance
metacluster_1/pattern_25.20616e-06
metacluster_1/pattern_180.0139389
Wt1
Pattern NameModiscoSignificance
metacluster_1/pattern_26.00349e-06
metacluster_1/pattern_80.045500099999999995
metacluster_1/pattern_180.0196792
Klf15
Pattern NameModiscoSignificance
metacluster_1/pattern_27.56273e-06
Zbtb17
Pattern NameModiscoSignificance
metacluster_1/pattern_21.73624e-05
metacluster_1/pattern_80.0178651
metacluster_1/pattern_180.0263697
Maz
Pattern NameModiscoSignificance
metacluster_1/pattern_23.32671e-05
metacluster_1/pattern_80.0599557
metacluster_1/pattern_180.05098540000000001
Zfx
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0121098
metacluster_1/pattern_40.00146535
metacluster_1/pattern_70.00401867
metacluster_1/pattern_80.00333587
metacluster_1/pattern_90.0242635
metacluster_1/pattern_130.00471875
metacluster_1/pattern_170.00831637
metacluster_1/pattern_180.013485399999999998
metacluster_1/pattern_200.042619300000000006
Klf1
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00022919900000000003
Egr1
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0279445
metacluster_1/pattern_180.0186638
Klf5
Pattern NameModiscoSignificance
metacluster_1/pattern_20.000550942
metacluster_1/pattern_180.0307377
Zfp281
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00149883
metacluster_1/pattern_180.0454463
Usf2
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00149883
metacluster_1/pattern_70.00011794299999999999
metacluster_1/pattern_90.0152135
metacluster_1/pattern_120.0024135000000000003
metacluster_1/pattern_130.030819599999999996
metacluster_1/pattern_170.023502000000000002
metacluster_1/pattern_200.0118464
Egr2
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0121098
Klf4
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0218883
Klf7
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0140804
metacluster_1/pattern_180.048693400000000005
Mxi1
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0218694
metacluster_1/pattern_80.05187719999999999
metacluster_1/pattern_90.00654449
metacluster_1/pattern_200.053246100000000005
E2f4
Pattern NameModiscoSignificance
metacluster_1/pattern_20.022713999999999998
metacluster_1/pattern_180.00219183
Rela
Pattern NameModiscoSignificance
metacluster_1/pattern_20.022956999999999998
Klf12
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0279445
E2f1
Pattern NameModiscoSignificance
metacluster_1/pattern_20.03568180000000001
metacluster_1/pattern_180.0243128
Klf8
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0366184
Nr1h4
Pattern NameModiscoSignificance
metacluster_1/pattern_20.052887199999999995
Mbd2
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0585472
E2f6
Pattern NameModiscoSignificance
metacluster_1/pattern_20.059526800000000005
E2f3
Pattern NameModiscoSignificance
metacluster_1/pattern_20.059526800000000005
Nfyb
Pattern NameModiscoSignificance
metacluster_1/pattern_32.6220799999999995e-10
Nfyc
Pattern NameModiscoSignificance
metacluster_1/pattern_38.97694e-06
Nfya
Pattern NameModiscoSignificance
metacluster_1/pattern_38.97694e-06
Foxi1
Pattern NameModiscoSignificance
metacluster_1/pattern_33.4883000000000005e-05
Pbx3
Pattern NameModiscoSignificance
metacluster_1/pattern_30.000149953
Nrf1
Pattern NameModiscoSignificance
metacluster_1/pattern_41.3439999999999999e-07
Zfp143
Pattern NameModiscoSignificance
metacluster_1/pattern_53.18428e-19
Thap11
Pattern NameModiscoSignificance
metacluster_1/pattern_51.97352e-18
Tbx2
Pattern NameModiscoSignificance
metacluster_1/pattern_52.2444499999999998e-13
Irf1
Pattern NameModiscoSignificance
metacluster_1/pattern_62.94829e-16
Irf2
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00109237
Irf7
Pattern NameModiscoSignificance
metacluster_1/pattern_64.1608100000000006e-05
Prdm1
Pattern NameModiscoSignificance
metacluster_1/pattern_66.95337e-05
Stat1
Pattern NameModiscoSignificance
metacluster_1/pattern_69.772909999999999e-05
Stat2
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00105111
Irf3
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00227152
Batf3
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00287901
Irf9
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00526318
Creb1
Pattern NameModiscoSignificance
metacluster_1/pattern_70.00572615
metacluster_1/pattern_90.0338037
Atf2
Pattern NameModiscoSignificance
metacluster_1/pattern_70.00367291
metacluster_1/pattern_90.0398683
Atf1
Pattern NameModiscoSignificance
metacluster_1/pattern_70.033917199999999995
metacluster_1/pattern_90.0405011
Atf7
Pattern NameModiscoSignificance
metacluster_1/pattern_70.00122976
metacluster_1/pattern_90.0213323
Crem
Pattern NameModiscoSignificance
metacluster_1/pattern_70.0295168
Jdp2
Pattern NameModiscoSignificance
metacluster_1/pattern_70.00379396
metacluster_1/pattern_90.035811199999999994
metacluster_1/pattern_200.0261904
Creb5
Pattern NameModiscoSignificance
metacluster_1/pattern_70.00401867
Atf3
Pattern NameModiscoSignificance
metacluster_1/pattern_70.0286493
metacluster_1/pattern_200.000928125
Usf1
Pattern NameModiscoSignificance
metacluster_1/pattern_70.0211863
metacluster_1/pattern_90.035811199999999994
Rfx1
Pattern NameModiscoSignificance
metacluster_1/pattern_70.0401943
metacluster_1/pattern_80.00889929
metacluster_1/pattern_144.3790299999999995e-09
metacluster_1/pattern_179.859690000000001e-05
Fosl2
Pattern NameModiscoSignificance
metacluster_1/pattern_70.0418594
metacluster_1/pattern_200.000232587
Taf1
Pattern NameModiscoSignificance
metacluster_1/pattern_82.8879099999999998e-06
Yy1
Pattern NameModiscoSignificance
metacluster_1/pattern_86.0021600000000005e-06
Zfp42
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00889929
Tfeb
Pattern NameModiscoSignificance
metacluster_1/pattern_90.00039976300000000003
Tfe3
Pattern NameModiscoSignificance
metacluster_1/pattern_90.00182954
Arntl
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0159906
Tfec
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0021779
Mitf
Pattern NameModiscoSignificance
metacluster_1/pattern_90.00116435
Clock
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0009191360000000001
Srebf1
Pattern NameModiscoSignificance
metacluster_1/pattern_90.052745900000000005
Bhlhe40
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0152135
Arnt
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0009191360000000001
Mlx
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0169017
Srebf2
Pattern NameModiscoSignificance
metacluster_1/pattern_90.00638287
Npas2
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0072623
metacluster_1/pattern_100.038028
Tcfl5
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0190464
Rxrg
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0224634
Mycn
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0263902
Bhlhe41
Pattern NameModiscoSignificance
metacluster_1/pattern_90.035811199999999994
Rxrb
Pattern NameModiscoSignificance
metacluster_1/pattern_90.035811199999999994
Creb3l2
Pattern NameModiscoSignificance
metacluster_1/pattern_90.05726619999999999
Max
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0405011
Hlf
Pattern NameModiscoSignificance
metacluster_1/pattern_90.042882199999999995
Myc
Pattern NameModiscoSignificance
metacluster_1/pattern_90.058745900000000004
Tcf3
Pattern NameModiscoSignificance
metacluster_1/pattern_100.00194926
Tcf4
Pattern NameModiscoSignificance
metacluster_1/pattern_100.00101402
Snai2
Pattern NameModiscoSignificance
metacluster_1/pattern_100.0009179189999999999
Tcf12
Pattern NameModiscoSignificance
metacluster_1/pattern_100.013592600000000002
Myf6
Pattern NameModiscoSignificance
metacluster_1/pattern_100.013592600000000002
Ascl2
Pattern NameModiscoSignificance
metacluster_1/pattern_100.00614442
Tcf7l1
Pattern NameModiscoSignificance
metacluster_1/pattern_100.00804504
Ptf1a
Pattern NameModiscoSignificance
metacluster_1/pattern_100.046632099999999996
Ascl1
Pattern NameModiscoSignificance
metacluster_1/pattern_100.011750299999999998
Myog
Pattern NameModiscoSignificance
metacluster_1/pattern_100.0326546
Myod1
Pattern NameModiscoSignificance
metacluster_1/pattern_100.013592600000000002
Mnt
Pattern NameModiscoSignificance
metacluster_1/pattern_100.013592600000000002
Pknox2
Pattern NameModiscoSignificance
metacluster_1/pattern_100.013592600000000002
Snai1
Pattern NameModiscoSignificance
metacluster_1/pattern_100.013592600000000002
Hes5
Pattern NameModiscoSignificance
metacluster_1/pattern_100.013592600000000002
Meis2
Pattern NameModiscoSignificance
metacluster_1/pattern_100.014643799999999998
Meis3
Pattern NameModiscoSignificance
metacluster_1/pattern_100.014643799999999998
Myf5
Pattern NameModiscoSignificance
metacluster_1/pattern_100.0155313
Nhlh2
Pattern NameModiscoSignificance
metacluster_1/pattern_100.0163
Hey2
Pattern NameModiscoSignificance
metacluster_1/pattern_100.0184766
Figla
Pattern NameModiscoSignificance
metacluster_1/pattern_100.0274158
Tal1
Pattern NameModiscoSignificance
metacluster_1/pattern_100.0340695
Bhlha15
Pattern NameModiscoSignificance
metacluster_1/pattern_100.0465283
Hes2
Pattern NameModiscoSignificance
metacluster_1/pattern_100.048717699999999996
Zeb1
Pattern NameModiscoSignificance
metacluster_1/pattern_100.056821
Runx1
Pattern NameModiscoSignificance
metacluster_1/pattern_110.00020976
Runx2
Pattern NameModiscoSignificance
metacluster_1/pattern_110.0161229
Runx3
Pattern NameModiscoSignificance
metacluster_1/pattern_110.00149436
Cbfb
Pattern NameModiscoSignificance
metacluster_1/pattern_110.0033082000000000003
Gfi1b
Pattern NameModiscoSignificance
metacluster_1/pattern_110.028719799999999997
Zbtb33
Pattern NameModiscoSignificance
metacluster_1/pattern_134.1212e-05
Rfx3
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00314634
metacluster_1/pattern_170.00036963800000000004
Rfx2
Pattern NameModiscoSignificance
metacluster_1/pattern_148.294739999999999e-09
metacluster_1/pattern_170.0184622
Rfx4
Pattern NameModiscoSignificance
metacluster_1/pattern_140.000245504
metacluster_1/pattern_170.023502000000000002
Rfx7
Pattern NameModiscoSignificance
metacluster_1/pattern_140.0016124000000000002
metacluster_1/pattern_170.023502000000000002
Rfx6
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00425652
metacluster_1/pattern_170.00286793
Rorc
Pattern NameModiscoSignificance
metacluster_1/pattern_160.00335236
Nr1d2
Pattern NameModiscoSignificance
metacluster_1/pattern_160.000894979
Pparg
Pattern NameModiscoSignificance
metacluster_1/pattern_160.00170914
Nr1d1
Pattern NameModiscoSignificance
metacluster_1/pattern_160.00898819
Stat3
Pattern NameModiscoSignificance
metacluster_1/pattern_170.0427903
Sall4
Pattern NameModiscoSignificance
metacluster_1/pattern_180.048693400000000005
Mef2a
Pattern NameModiscoSignificance
metacluster_1/pattern_190.000203157
Mef2d
Pattern NameModiscoSignificance
metacluster_1/pattern_192.5430999999999998e-05
Mef2c
Pattern NameModiscoSignificance
metacluster_1/pattern_196.51427e-05
Mafk
Pattern NameModiscoSignificance
metacluster_1/pattern_204.5732700000000003e-05
Mafa
Pattern NameModiscoSignificance
metacluster_1/pattern_200.000232587
Bach2
Pattern NameModiscoSignificance
metacluster_1/pattern_200.000281873
Fos
Pattern NameModiscoSignificance
metacluster_1/pattern_200.00035398300000000004
Fosl1
Pattern NameModiscoSignificance
metacluster_1/pattern_200.0005225480000000001
Nfe2l2
Pattern NameModiscoSignificance
metacluster_1/pattern_200.0005225480000000001
Jun
Pattern NameModiscoSignificance
metacluster_1/pattern_200.000582859
Mafb
Pattern NameModiscoSignificance
metacluster_1/pattern_200.0007991989999999999
Jund
Pattern NameModiscoSignificance
metacluster_1/pattern_200.00807645
Fosb
Pattern NameModiscoSignificance
metacluster_1/pattern_200.00292235
Bach1
Pattern NameModiscoSignificance
metacluster_1/pattern_200.00358105
Junb
Pattern NameModiscoSignificance
metacluster_1/pattern_200.00499087
Batf
Pattern NameModiscoSignificance
metacluster_1/pattern_200.00540275
Zic2
Pattern NameModiscoSignificance
metacluster_1/pattern_200.0371431
Nfe2
Pattern NameModiscoSignificance
metacluster_1/pattern_200.0550358
Nfib
Pattern NameModiscoSignificance
metacluster_1/pattern_214.43102e-05
Nfia
Pattern NameModiscoSignificance
metacluster_1/pattern_217.50111e-05
Nfic
Pattern NameModiscoSignificance
metacluster_1/pattern_210.00902908
In [6]:
display_paiwise_pattern_comparison(data_name, modisco_root, homer_root)
Number of CISBP TFs obtained by TF-MoDISco and Homer
Shared TFs between TF-MoDISco and Homer: #77
TF NameModiscoHomer
Elf4
Pattern NameModiscoSignificance
metacluster_1/pattern_00.010397100000000001
Pattern NameHomerSignificance
motif2.motif0.000553664
Nfyb
Pattern NameModiscoSignificance
metacluster_1/pattern_32.6220799999999995e-10
Pattern NameHomerSignificance
motif9.motif3.44494e-08
Klf1
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00022919900000000003
Pattern NameHomerSignificance
motif3.motif0.025321200000000002
Hey2
Pattern NameModiscoSignificance
metacluster_1/pattern_100.0184766
Pattern NameHomerSignificance
motif17.motif0.039338599999999994
XP_911724.4
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00255112
Pattern NameHomerSignificance
motif2.motif1.76169e-05
Myf6
Pattern NameModiscoSignificance
metacluster_1/pattern_100.013592600000000002
Pattern NameHomerSignificance
motif17.motif0.0232814
Etv6
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00223337
metacluster_1/pattern_150.05935169999999999
Pattern NameHomerSignificance
motif2.motif0.00589651
Spic
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0432097
Pattern NameHomerSignificance
motif2.motif0.0520721
Klf4
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0218883
Pattern NameHomerSignificance
motif3.motif0.00192459
Foxi1
Pattern NameModiscoSignificance
metacluster_1/pattern_33.4883000000000005e-05
Pattern NameHomerSignificance
motif9.motif0.00019554299999999998
Ctcfl
Pattern NameModiscoSignificance
metacluster_1/pattern_14.910130000000001e-09
metacluster_1/pattern_20.035363099999999995
Pattern NameHomerSignificance
motif1.motif0.00156309
Klf7
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0140804
metacluster_1/pattern_180.048693400000000005
Pattern NameHomerSignificance
motif3.motif0.00180375
Creb1
Pattern NameModiscoSignificance
metacluster_1/pattern_70.00572615
metacluster_1/pattern_90.0338037
Pattern NameHomerSignificance
motif8.motif0.042996
Etv2
Pattern NameModiscoSignificance
metacluster_1/pattern_02.36294e-05
Pattern NameHomerSignificance
motif2.motif0.000383207
Zbtb33
Pattern NameModiscoSignificance
metacluster_1/pattern_134.1212e-05
Pattern NameHomerSignificance
motif13.motif0.00456791
Klf6
Pattern NameModiscoSignificance
metacluster_1/pattern_25.20616e-06
metacluster_1/pattern_180.0139389
Pattern NameHomerSignificance
motif3.motif0.00862148
Ctcf
Pattern NameModiscoSignificance
metacluster_1/pattern_13.88751e-09
Pattern NameHomerSignificance
motif1.motif4.0905e-05
Snai1
Pattern NameModiscoSignificance
metacluster_1/pattern_100.013592600000000002
Pattern NameHomerSignificance
motif17.motif0.0403263
Yy1
Pattern NameModiscoSignificance
metacluster_1/pattern_86.0021600000000005e-06
Pattern NameHomerSignificance
motif12.motif0.00225626
Nfyc
Pattern NameModiscoSignificance
metacluster_1/pattern_38.97694e-06
Pattern NameHomerSignificance
motif9.motif1.41947e-06
Elf2
Pattern NameModiscoSignificance
metacluster_1/pattern_00.017297099999999996
metacluster_1/pattern_150.0220753
Pattern NameHomerSignificance
motif2.motif0.0116345
Sp4
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0121098
metacluster_1/pattern_180.048693400000000005
Pattern NameHomerSignificance
motif3.motif0.042450699999999994
Maz
Pattern NameModiscoSignificance
metacluster_1/pattern_23.32671e-05
metacluster_1/pattern_80.0599557
metacluster_1/pattern_180.05098540000000001
Pattern NameHomerSignificance
motif18.motif0.00962028
Tcf12
Pattern NameModiscoSignificance
metacluster_1/pattern_100.013592600000000002
Pattern NameHomerSignificance
motif17.motif0.033786699999999996
Wt1
Pattern NameModiscoSignificance
metacluster_1/pattern_26.00349e-06
metacluster_1/pattern_80.045500099999999995
metacluster_1/pattern_180.0196792
Pattern NameHomerSignificance
motif18.motif0.00654703
Elf1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00118975
metacluster_1/pattern_120.043664499999999995
Pattern NameHomerSignificance
motif2.motif0.00144265
Fli1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00236967
metacluster_1/pattern_20.035363099999999995
metacluster_1/pattern_120.043664499999999995
metacluster_1/pattern_180.0454463
Pattern NameHomerSignificance
motif2.motif2.56938e-05
Sp1
Pattern NameModiscoSignificance
metacluster_1/pattern_20.000615076
metacluster_1/pattern_40.0145912
metacluster_1/pattern_70.00148856
metacluster_1/pattern_80.000263053
metacluster_1/pattern_90.035811199999999994
metacluster_1/pattern_120.043664499999999995
metacluster_1/pattern_130.030819599999999996
metacluster_1/pattern_170.023502000000000002
metacluster_1/pattern_180.013485399999999998
metacluster_1/pattern_200.0143263
Pattern NameHomerSignificance
motif3.motif0.0106742
motif18.motif0.00962028
Egr1
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0279445
metacluster_1/pattern_180.0186638
Pattern NameHomerSignificance
motif3.motif0.0363784
Zfp143
Pattern NameModiscoSignificance
metacluster_1/pattern_53.18428e-19
Pattern NameHomerSignificance
motif4.motif5.0222100000000003e-08
Pbx3
Pattern NameModiscoSignificance
metacluster_1/pattern_30.000149953
Pattern NameHomerSignificance
motif9.motif0.0006830660000000001
Taf1
Pattern NameModiscoSignificance
metacluster_1/pattern_82.8879099999999998e-06
Pattern NameHomerSignificance
motif12.motif0.00012856399999999998
Thap11
Pattern NameModiscoSignificance
metacluster_1/pattern_51.97352e-18
Pattern NameHomerSignificance
motif4.motif1.7139299999999998e-07
Meis2
Pattern NameModiscoSignificance
metacluster_1/pattern_100.014643799999999998
Pattern NameHomerSignificance
motif17.motif0.0491987
Spdef
Pattern NameModiscoSignificance
metacluster_1/pattern_00.035203899999999996
Pattern NameHomerSignificance
motif2.motif0.0196548
Nrf1
Pattern NameModiscoSignificance
metacluster_1/pattern_41.3439999999999999e-07
Pattern NameHomerSignificance
motif11.motif0.000276374
Klf5
Pattern NameModiscoSignificance
metacluster_1/pattern_20.000550942
metacluster_1/pattern_180.0307377
Pattern NameHomerSignificance
motif3.motif0.0337875
motif18.motif0.051097199999999995
Tcf4
Pattern NameModiscoSignificance
metacluster_1/pattern_100.00101402
Pattern NameHomerSignificance
motif17.motif0.0328666
Gabpa
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0023823
metacluster_1/pattern_120.055277099999999996
metacluster_1/pattern_180.0363907
Pattern NameHomerSignificance
motif2.motif0.00196984
Snai2
Pattern NameModiscoSignificance
metacluster_1/pattern_100.0009179189999999999
Pattern NameHomerSignificance
motif17.motif0.039338599999999994
Zbtb17
Pattern NameModiscoSignificance
metacluster_1/pattern_21.73624e-05
metacluster_1/pattern_80.0178651
metacluster_1/pattern_180.0263697
Pattern NameHomerSignificance
motif18.motif0.00282825
Etv3
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0023823
Pattern NameHomerSignificance
motif2.motif1.76169e-05
Ascl2
Pattern NameModiscoSignificance
metacluster_1/pattern_100.00614442
Pattern NameHomerSignificance
motif17.motif0.053396900000000004
Npas2
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0072623
metacluster_1/pattern_100.038028
Pattern NameHomerSignificance
motif17.motif0.054239300000000004
Tbx2
Pattern NameModiscoSignificance
metacluster_1/pattern_52.2444499999999998e-13
Pattern NameHomerSignificance
motif4.motif2.248e-06
Meis3
Pattern NameModiscoSignificance
metacluster_1/pattern_100.014643799999999998
Pattern NameHomerSignificance
motif17.motif0.053396900000000004
Tcf3
Pattern NameModiscoSignificance
metacluster_1/pattern_100.00194926
Pattern NameHomerSignificance
motif17.motif0.033786699999999996
Sp2
Pattern NameModiscoSignificance
metacluster_1/pattern_21.2795399999999998e-16
metacluster_1/pattern_40.000572339
metacluster_1/pattern_70.00218369
metacluster_1/pattern_84.66309e-05
metacluster_1/pattern_90.045740499999999996
metacluster_1/pattern_120.043664499999999995
metacluster_1/pattern_130.00729801
metacluster_1/pattern_170.00400695
metacluster_1/pattern_180.000124249
metacluster_1/pattern_200.0137694
Pattern NameHomerSignificance
motif3.motif0.00180375
Fev
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00223337
metacluster_1/pattern_120.0303967
metacluster_1/pattern_180.0363907
Pattern NameHomerSignificance
motif2.motif0.00176313
Klf8
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0366184
Pattern NameHomerSignificance
motif3.motif0.00241416
Erg
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00236967
metacluster_1/pattern_120.0182938
metacluster_1/pattern_180.052051599999999996
Pattern NameHomerSignificance
motif2.motif2.70705e-07
Zfp281
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00149883
metacluster_1/pattern_180.0454463
Pattern NameHomerSignificance
motif18.motif0.00962028
Elk1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00236967
metacluster_1/pattern_120.00784583
metacluster_1/pattern_180.052051599999999996
Pattern NameHomerSignificance
motif2.motif0.000144405
Sp3
Pattern NameModiscoSignificance
metacluster_1/pattern_22.4551199999999997e-13
metacluster_1/pattern_40.00242404
metacluster_1/pattern_70.023395
metacluster_1/pattern_80.000507941
metacluster_1/pattern_130.0131762
metacluster_1/pattern_170.010631
metacluster_1/pattern_180.00581856
metacluster_1/pattern_200.0448791
Pattern NameHomerSignificance
motif3.motif0.00241143
Klf3
Pattern NameModiscoSignificance
metacluster_1/pattern_23.4935300000000004e-09
metacluster_1/pattern_80.027338799999999996
metacluster_1/pattern_180.013485399999999998
Pattern NameHomerSignificance
motif3.motif0.00241143
Nhlh2
Pattern NameModiscoSignificance
metacluster_1/pattern_100.0163
Pattern NameHomerSignificance
motif17.motif0.033786699999999996
Myog
Pattern NameModiscoSignificance
metacluster_1/pattern_100.0326546
Pattern NameHomerSignificance
motif17.motif0.0407856
Elf3
Pattern NameModiscoSignificance
metacluster_1/pattern_00.043486500000000004
Pattern NameHomerSignificance
motif2.motif0.010751299999999998
Etv1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00248231
metacluster_1/pattern_120.048428399999999996
metacluster_1/pattern_180.025336400000000002
Pattern NameHomerSignificance
motif2.motif1.11552e-07
Nfya
Pattern NameModiscoSignificance
metacluster_1/pattern_38.97694e-06
Pattern NameHomerSignificance
motif9.motif2.96566e-07
Elk4
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00281668
metacluster_1/pattern_120.0182938
metacluster_1/pattern_180.0454463
Pattern NameHomerSignificance
motif2.motif2.70705e-07
Myod1
Pattern NameModiscoSignificance
metacluster_1/pattern_100.013592600000000002
Pattern NameHomerSignificance
motif17.motif0.0474719
Pknox2
Pattern NameModiscoSignificance
metacluster_1/pattern_100.013592600000000002
Pattern NameHomerSignificance
motif17.motif0.0474719
Klf12
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0279445
Pattern NameHomerSignificance
motif3.motif0.034587599999999996
Tcf7l1
Pattern NameModiscoSignificance
metacluster_1/pattern_100.00804504
Pattern NameHomerSignificance
motif17.motif0.0232814
Etv5
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00087742
metacluster_1/pattern_120.048428399999999996
metacluster_1/pattern_180.0178352
Pattern NameHomerSignificance
motif2.motif2.92306e-07
Sp5
Pattern NameModiscoSignificance
metacluster_1/pattern_21.7144999999999998e-06
Pattern NameHomerSignificance
motif18.motif0.00962028
Elk3
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00236967
metacluster_1/pattern_120.048428399999999996
metacluster_1/pattern_180.034193699999999994
Pattern NameHomerSignificance
motif2.motif0.00030739200000000003
Sall4
Pattern NameModiscoSignificance
metacluster_1/pattern_180.048693400000000005
Pattern NameHomerSignificance
motif18.motif0.051097199999999995
E2f4
Pattern NameModiscoSignificance
metacluster_1/pattern_20.022713999999999998
metacluster_1/pattern_180.00219183
Pattern NameHomerSignificance
motif3.motif0.000738507
Spi1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.058554300000000004
Pattern NameHomerSignificance
motif2.motif0.057663400000000004
Zfx
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0121098
metacluster_1/pattern_40.00146535
metacluster_1/pattern_70.00401867
metacluster_1/pattern_80.00333587
metacluster_1/pattern_90.0242635
metacluster_1/pattern_130.00471875
metacluster_1/pattern_170.00831637
metacluster_1/pattern_180.013485399999999998
metacluster_1/pattern_200.042619300000000006
Pattern NameHomerSignificance
motif3.motif0.0219775
Etv4
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00236967
metacluster_1/pattern_120.048428399999999996
metacluster_1/pattern_180.0252078
Pattern NameHomerSignificance
motif2.motif0.00144265
Ehf
Pattern NameModiscoSignificance
metacluster_1/pattern_00.022679400000000002
Pattern NameHomerSignificance
motif2.motif0.057663400000000004
Ets1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00223337
metacluster_1/pattern_120.0182938
metacluster_1/pattern_180.0363907
Pattern NameHomerSignificance
motif2.motif1.8861700000000003e-06
Elf5
Pattern NameModiscoSignificance
metacluster_1/pattern_00.053658000000000004
Pattern NameHomerSignificance
motif2.motif0.00909382
Zfp42
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00889929
Pattern NameHomerSignificance
motif12.motif0.0403081
Unique TF-MoDISco TFs: #100
TF NameModiscoHomer
Fosl2
Pattern NameModiscoSignificance
metacluster_1/pattern_70.0418594
metacluster_1/pattern_200.000232587
Absent
Ptf1a
Pattern NameModiscoSignificance
metacluster_1/pattern_100.046632099999999996
Absent
Nfe2l2
Pattern NameModiscoSignificance
metacluster_1/pattern_200.0005225480000000001
Absent
Stat1
Pattern NameModiscoSignificance
metacluster_1/pattern_69.772909999999999e-05
Absent
Irf8
Pattern NameModiscoSignificance
metacluster_1/pattern_00.047997500000000005
metacluster_1/pattern_62.2131100000000002e-05
Absent
Klf15
Pattern NameModiscoSignificance
metacluster_1/pattern_27.56273e-06
Absent
Irf7
Pattern NameModiscoSignificance
metacluster_1/pattern_64.1608100000000006e-05
Absent
Mycn
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0263902
Absent
Srebf2
Pattern NameModiscoSignificance
metacluster_1/pattern_90.00638287
Absent
Figla
Pattern NameModiscoSignificance
metacluster_1/pattern_100.0274158
Absent
Jdp2
Pattern NameModiscoSignificance
metacluster_1/pattern_70.00379396
metacluster_1/pattern_90.035811199999999994
metacluster_1/pattern_200.0261904
Absent
Usf1
Pattern NameModiscoSignificance
metacluster_1/pattern_70.0211863
metacluster_1/pattern_90.035811199999999994
Absent
Bhlhe40
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0152135
Absent
Cbfb
Pattern NameModiscoSignificance
metacluster_1/pattern_110.0033082000000000003
Absent
Tfe3
Pattern NameModiscoSignificance
metacluster_1/pattern_90.00182954
Absent
Tal1
Pattern NameModiscoSignificance
metacluster_1/pattern_100.0340695
Absent
Myc
Pattern NameModiscoSignificance
metacluster_1/pattern_90.058745900000000004
Absent
Stat2
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00105111
Absent
Pparg
Pattern NameModiscoSignificance
metacluster_1/pattern_160.00170914
Absent
Tfec
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0021779
Absent
Tcfl5
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0190464
Absent
E2f6
Pattern NameModiscoSignificance
metacluster_1/pattern_20.059526800000000005
Absent
Crem
Pattern NameModiscoSignificance
metacluster_1/pattern_70.0295168
Absent
Mafk
Pattern NameModiscoSignificance
metacluster_1/pattern_204.5732700000000003e-05
Absent
Nfia
Pattern NameModiscoSignificance
metacluster_1/pattern_217.50111e-05
Absent
Runx3
Pattern NameModiscoSignificance
metacluster_1/pattern_110.00149436
Absent
Zic2
Pattern NameModiscoSignificance
metacluster_1/pattern_200.0371431
Absent
Mlx
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0169017
Absent
Mxi1
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0218694
metacluster_1/pattern_80.05187719999999999
metacluster_1/pattern_90.00654449
metacluster_1/pattern_200.053246100000000005
Absent
Hes2
Pattern NameModiscoSignificance
metacluster_1/pattern_100.048717699999999996
Absent
Bach1
Pattern NameModiscoSignificance
metacluster_1/pattern_200.00358105
Absent
Zeb1
Pattern NameModiscoSignificance
metacluster_1/pattern_100.056821
Absent
Rfx1
Pattern NameModiscoSignificance
metacluster_1/pattern_70.0401943
metacluster_1/pattern_80.00889929
metacluster_1/pattern_144.3790299999999995e-09
metacluster_1/pattern_179.859690000000001e-05
Absent
Rfx6
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00425652
metacluster_1/pattern_170.00286793
Absent
Batf3
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00287901
Absent
Rfx3
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00314634
metacluster_1/pattern_170.00036963800000000004
Absent
Gfi1b
Pattern NameModiscoSignificance
metacluster_1/pattern_110.028719799999999997
Absent
Irf9
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00526318
Absent
Mef2a
Pattern NameModiscoSignificance
metacluster_1/pattern_190.000203157
Absent
Mbd2
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0585472
Absent
Atf2
Pattern NameModiscoSignificance
metacluster_1/pattern_70.00367291
metacluster_1/pattern_90.0398683
Absent
Creb3l2
Pattern NameModiscoSignificance
metacluster_1/pattern_90.05726619999999999
Absent
Rfx4
Pattern NameModiscoSignificance
metacluster_1/pattern_140.000245504
metacluster_1/pattern_170.023502000000000002
Absent
Rxrb
Pattern NameModiscoSignificance
metacluster_1/pattern_90.035811199999999994
Absent
Mef2d
Pattern NameModiscoSignificance
metacluster_1/pattern_192.5430999999999998e-05
Absent
Mef2c
Pattern NameModiscoSignificance
metacluster_1/pattern_196.51427e-05
Absent
Arnt
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0009191360000000001
Absent
Max
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0405011
Absent
Nfe2
Pattern NameModiscoSignificance
metacluster_1/pattern_200.0550358
Absent
Rela
Pattern NameModiscoSignificance
metacluster_1/pattern_20.022956999999999998
Absent
Runx1
Pattern NameModiscoSignificance
metacluster_1/pattern_110.00020976
Absent
Mafb
Pattern NameModiscoSignificance
metacluster_1/pattern_200.0007991989999999999
Absent
Creb5
Pattern NameModiscoSignificance
metacluster_1/pattern_70.00401867
Absent
Usf2
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00149883
metacluster_1/pattern_70.00011794299999999999
metacluster_1/pattern_90.0152135
metacluster_1/pattern_120.0024135000000000003
metacluster_1/pattern_130.030819599999999996
metacluster_1/pattern_170.023502000000000002
metacluster_1/pattern_200.0118464
Absent
Bach2
Pattern NameModiscoSignificance
metacluster_1/pattern_200.000281873
Absent
Ascl1
Pattern NameModiscoSignificance
metacluster_1/pattern_100.011750299999999998
Absent
Fosl1
Pattern NameModiscoSignificance
metacluster_1/pattern_200.0005225480000000001
Absent
Nfic
Pattern NameModiscoSignificance
metacluster_1/pattern_210.00902908
Absent
Irf2
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00109237
Absent
Atf7
Pattern NameModiscoSignificance
metacluster_1/pattern_70.00122976
metacluster_1/pattern_90.0213323
Absent
Hes5
Pattern NameModiscoSignificance
metacluster_1/pattern_100.013592600000000002
Absent
E2f3
Pattern NameModiscoSignificance
metacluster_1/pattern_20.059526800000000005
Absent
Rxrg
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0224634
Absent
Irf4
Pattern NameModiscoSignificance
metacluster_1/pattern_00.05295130000000001
metacluster_1/pattern_60.0243343
Absent
Bhlha15
Pattern NameModiscoSignificance
metacluster_1/pattern_100.0465283
Absent
Tfeb
Pattern NameModiscoSignificance
metacluster_1/pattern_90.00039976300000000003
Absent
Rfx7
Pattern NameModiscoSignificance
metacluster_1/pattern_140.0016124000000000002
metacluster_1/pattern_170.023502000000000002
Absent
Stat4
Pattern NameModiscoSignificance
metacluster_1/pattern_00.035203899999999996
metacluster_1/pattern_170.05495830000000001
Absent
Egr2
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0121098
Absent
Mitf
Pattern NameModiscoSignificance
metacluster_1/pattern_90.00116435
Absent
Nr1d2
Pattern NameModiscoSignificance
metacluster_1/pattern_160.000894979
Absent
Bhlhe41
Pattern NameModiscoSignificance
metacluster_1/pattern_90.035811199999999994
Absent
Prdm1
Pattern NameModiscoSignificance
metacluster_1/pattern_66.95337e-05
Absent
Nr1d1
Pattern NameModiscoSignificance
metacluster_1/pattern_160.00898819
Absent
Fos
Pattern NameModiscoSignificance
metacluster_1/pattern_200.00035398300000000004
Absent
Rfx2
Pattern NameModiscoSignificance
metacluster_1/pattern_148.294739999999999e-09
metacluster_1/pattern_170.0184622
Absent
E2f1
Pattern NameModiscoSignificance
metacluster_1/pattern_20.03568180000000001
metacluster_1/pattern_180.0243128
Absent
Nr1h4
Pattern NameModiscoSignificance
metacluster_1/pattern_20.052887199999999995
Absent
Jun
Pattern NameModiscoSignificance
metacluster_1/pattern_200.000582859
Absent
Runx2
Pattern NameModiscoSignificance
metacluster_1/pattern_110.0161229
Absent
Fosb
Pattern NameModiscoSignificance
metacluster_1/pattern_200.00292235
Absent
Stat3
Pattern NameModiscoSignificance
metacluster_1/pattern_170.0427903
Absent
Srebf1
Pattern NameModiscoSignificance
metacluster_1/pattern_90.052745900000000005
Absent
Batf
Pattern NameModiscoSignificance
metacluster_1/pattern_200.00540275
Absent
Rorc
Pattern NameModiscoSignificance
metacluster_1/pattern_160.00335236
Absent
Ets2
Pattern NameModiscoSignificance
metacluster_1/pattern_00.035203899999999996
Absent
Arntl
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0159906
Absent
Nfib
Pattern NameModiscoSignificance
metacluster_1/pattern_214.43102e-05
Absent
Irf3
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00227152
Absent
Atf1
Pattern NameModiscoSignificance
metacluster_1/pattern_70.033917199999999995
metacluster_1/pattern_90.0405011
Absent
Jund
Pattern NameModiscoSignificance
metacluster_1/pattern_200.00807645
Absent
Clock
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0009191360000000001
Absent
Spib
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00483055
metacluster_1/pattern_60.0139202
Absent
Junb
Pattern NameModiscoSignificance
metacluster_1/pattern_200.00499087
Absent
Myf5
Pattern NameModiscoSignificance
metacluster_1/pattern_100.0155313
Absent
Mnt
Pattern NameModiscoSignificance
metacluster_1/pattern_100.013592600000000002
Absent
Atf3
Pattern NameModiscoSignificance
metacluster_1/pattern_70.0286493
metacluster_1/pattern_200.000928125
Absent
Hlf
Pattern NameModiscoSignificance
metacluster_1/pattern_90.042882199999999995
Absent
Mafa
Pattern NameModiscoSignificance
metacluster_1/pattern_200.000232587
Absent
Irf1
Pattern NameModiscoSignificance
metacluster_1/pattern_62.94829e-16
Absent
Unique Homer TFs: #4
TF NameModiscoHomer
Zscan10Absent
Pattern NameHomerSignificance
motif18.motif0.051097199999999995
Irf6Absent
Pattern NameHomerSignificance
motif2.motif0.027464799999999998
MlxipAbsent
Pattern NameHomerSignificance
motif17.motif0.039338599999999994
Zbtb1Absent
Pattern NameHomerSignificance
motif3.motif0.0578826