# Parameters
data_name = "Hand1"
task_idxs = "0-213,216-278"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
overwrite = False

from matlas.reports import collect_motifDB_to_be_displayed, display_comparative_cell_types

load data from labcluster

Using TensorFlow backend.
2019-08-23 11:10:57,252 [WARNING] git-lfs not installed

homer_matches, modisco_matches = collect_motifDB_to_be_displayed(task_idxs, homer_root, modisco_root, 
                                                              overwrite=False)

TF-MoDISco is using the TensorFlow backend.

display_comparative_cell_types(data_name, homer_matches, modisco_matches)

Hand1: Motif: M08769_2.00

Forward PWM

Reverse PWM

No Cell types that both TF-MoDISco and Homer finds Hand1

Unique Cell types only TF-MoDISco finds Hand1: #6

Cell type	Modisco	Homer
ES;E14;A;GEO	Pattern: metacluster_0/pattern_19 Significance: 0.038042599999999996	Absent
ES;v6.5;A;GEO	Pattern: metacluster_1/pattern_16 Significance: 0.0358473	Absent
MTR_NRN_MN1;methyl3;D;En	Pattern: metacluster_0/pattern_15 Significance: 1.54001e-07	Absent
MN1;D;En	Pattern: metacluster_1/pattern_17 Significance: 2.48258e-08	Absent
npES;ZHBTC4;Brg1fl_fl;untreat;A;GEO	Pattern: metacluster_1/pattern_21 Significance: 0.0346939	Absent
ES;C57BL_6J;R1;D;En	Pattern: metacluster_1/pattern_19 Significance: 0.033016199999999996	Absent

Unique Cell types only Homer finds Hand1: #2

Cell type	Modisco	Homer
T_MLD;TCR_SV40-I_CD8+;D28;A;GEO	Absent	Pattern: motif4.motif Significance: 0.0343497
SKN_EPTHL;A;GEO	Absent	Pattern: motif3.motif Significance: 0.030587