# Parameters
data_name = "Rorb"
task_idxs = "0-213,216-278"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
overwrite = False

from matlas.reports import collect_motifDB_to_be_displayed, display_comparative_cell_types

load data from labcluster

Using TensorFlow backend.
2019-08-23 11:32:13,988 [WARNING] git-lfs not installed

homer_matches, modisco_matches = collect_motifDB_to_be_displayed(task_idxs, homer_root, modisco_root, 
                                                              overwrite=False)

TF-MoDISco is using the TensorFlow backend.

display_comparative_cell_types(data_name, homer_matches, modisco_matches)

Rorb: Motif: M00820_2.00

Forward PWM

Reverse PWM

No Cell types that both TF-MoDISco and Homer finds Rorb

Unique Cell types only TF-MoDISco finds Rorb: #8

Cell type	Modisco	Homer
wES;posterior;1;E8.5;A;GEO	Pattern: metacluster_0/pattern_21 Significance: 0.0260385	Absent
ILC3;A;GEO	Pattern: metacluster_1/pattern_7 Significance: 0.05238330000000001	Absent
ThMS_MEC;Aire++;A;GEO	Pattern: metacluster_1/pattern_8 Significance: 0.030496199999999998	Absent
ROD_PHT_RCPTR;A;GEO	Pattern: metacluster_1/pattern_16 Significance: 0.0113781	Absent
NTRPHL;A;CL	Pattern: metacluster_1/pattern_3 Significance: 0.0596692	Absent
GCN_PHT_RCPTR;A;GEO	Pattern: metacluster_1/pattern_5 Significance: 0.0193065	Absent
BL_CN_PHT_RCPTR;A;GEO	Pattern: metacluster_1/pattern_7 Significance: 0.055967499999999996	Absent
aNonTfh_mut;A;CL	Pattern: metacluster_1/pattern_6 Significance: 0.0529586	Absent

Unique Cell types only Homer finds Rorb: #2

Cell type	Modisco	Homer
ES;129S1_SVImJ_CJ7;D;En	Absent	Pattern: motif11.motif Significance: 0.059448400000000005
RTN;D1;D;En	Absent	Pattern: motif8.motif Significance: 0.0461394