Index of /kundaje/marinovg/oak/various/papers/2025_CtoT_E_coli-SMF/2025-02-14-ChIP-exo-datasets/10-E.coli-Cra-RpoB-GSE65641

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[DIR]Cra_acetate_1.1x36mers.unique.GPS/2025-02-22 04:52 -  
[TXT]Cra_acetate_1.SE.a.5p.counts.minus.bigWig2025-02-17 04:13 758K 
[TXT]Cra_acetate_1.SE.a.5p.counts.plus.bigWig2025-02-17 04:13 751K 
[DIR]Cra_acetate_1.SE.a.GPS/2025-03-21 17:32 -  
[TXT]Cra_acetate_1.SE.a.bigWig2025-02-17 04:13 1.9M 
[TXT]Cra_acetate_1.SE.a.minus.bigWig2025-02-17 04:13 1.0M 
[TXT]Cra_acetate_1.SE.a.plus.bigWig2025-02-17 04:13 1.0M 
[ ]Cra_acetate_1.fastq.lines2025-02-16 01:43 9  
[DIR]Cra_acetate_2.1x36mers.unique.GPS/2025-02-22 04:52 -  
[TXT]Cra_acetate_2.SE.a.5p.counts.minus.bigWig2025-02-17 04:13 731K 
[TXT]Cra_acetate_2.SE.a.5p.counts.plus.bigWig2025-02-17 04:13 723K 
[DIR]Cra_acetate_2.SE.a.GPS/2025-03-21 17:33 -  
[TXT]Cra_acetate_2.SE.a.bigWig2025-02-17 04:13 1.9M 
[TXT]Cra_acetate_2.SE.a.minus.bigWig2025-02-17 04:13 1.0M 
[TXT]Cra_acetate_2.SE.a.plus.bigWig2025-02-17 04:13 1.0M 
[ ]Cra_acetate_2.fastq.lines2025-02-16 01:43 9  
[DIR]Cra_fructose_1.1x36mers.unique.GPS/2025-02-22 04:53 -  
[TXT]Cra_fructose_1.SE.a.5p.counts.minus.bigWig2025-02-17 04:13 1.5M 
[TXT]Cra_fructose_1.SE.a.5p.counts.plus.bigWig2025-02-17 04:13 1.5M 
[DIR]Cra_fructose_1.SE.a.GPS/2025-03-21 17:33 -  
[TXT]Cra_fructose_1.SE.a.bigWig2025-02-17 04:13 5.3M 
[TXT]Cra_fructose_1.SE.a.minus.bigWig2025-02-17 04:13 2.6M 
[TXT]Cra_fructose_1.SE.a.plus.bigWig2025-02-17 04:13 2.6M 
[ ]Cra_fructose_1.fastq.lines2025-02-16 01:43 9  
[DIR]Cra_fructose_2.1x36mers.unique.GPS/2025-02-22 05:02 -  
[TXT]Cra_fructose_2.SE.a.5p.counts.minus.bigWig2025-02-17 04:13 1.4M 
[TXT]Cra_fructose_2.SE.a.5p.counts.plus.bigWig2025-02-17 04:13 1.4M 
[DIR]Cra_fructose_2.SE.a.GPS/2025-03-21 17:33 -  
[TXT]Cra_fructose_2.SE.a.bigWig2025-02-17 04:13 5.0M 
[TXT]Cra_fructose_2.SE.a.minus.bigWig2025-02-17 04:13 2.4M 
[TXT]Cra_fructose_2.SE.a.plus.bigWig2025-02-17 04:13 2.4M 
[ ]Cra_fructose_2.fastq.lines2025-02-16 01:43 8  
[DIR]Cra_glucose_1.1x36mers.unique.GPS/2025-02-22 05:02 -  
[TXT]Cra_glucose_1.SE.a.5p.counts.minus.bigWig2025-02-17 04:13 2.2M 
[TXT]Cra_glucose_1.SE.a.5p.counts.plus.bigWig2025-02-17 04:13 2.2M 
[DIR]Cra_glucose_1.SE.a.GPS/2025-03-21 17:32 -  
[TXT]Cra_glucose_1.SE.a.bigWig2025-02-17 04:13 6.9M 
[TXT]Cra_glucose_1.SE.a.minus.bigWig2025-02-17 04:13 3.3M 
[TXT]Cra_glucose_1.SE.a.plus.bigWig2025-02-17 04:13 3.3M 
[ ]Cra_glucose_1.fastq.lines2025-02-16 01:49 9  
[DIR]Cra_glucose_2.1x36mers.unique.GPS/2025-02-22 05:04 -  
[TXT]Cra_glucose_2.SE.a.5p.counts.minus.bigWig2025-02-17 04:13 2.0M 
[TXT]Cra_glucose_2.SE.a.5p.counts.plus.bigWig2025-02-17 04:13 2.0M 
[DIR]Cra_glucose_2.SE.a.GPS/2025-03-21 17:33 -  
[TXT]Cra_glucose_2.SE.a.bigWig2025-02-17 04:13 6.3M 
[TXT]Cra_glucose_2.SE.a.minus.bigWig2025-02-17 04:13 3.0M 
[TXT]Cra_glucose_2.SE.a.plus.bigWig2025-02-17 04:13 3.0M 
[ ]Cra_glucose_2.fastq.lines2025-02-16 01:47 9  
[DIR]RpoB_WT_1.1x36mers.unique.GPS/2025-02-22 05:17 -  
[TXT]RpoB_WT_1.SE.a.5p.counts.minus.bigWig2025-02-17 04:13 4.6M 
[TXT]RpoB_WT_1.SE.a.5p.counts.plus.bigWig2025-02-17 04:13 4.6M 
[DIR]RpoB_WT_1.SE.a.GPS/2025-03-21 17:33 -  
[TXT]RpoB_WT_1.SE.a.bigWig2025-02-17 04:13 13M 
[TXT]RpoB_WT_1.SE.a.minus.bigWig2025-02-17 04:13 9.1M 
[TXT]RpoB_WT_1.SE.a.plus.bigWig2025-02-17 04:13 9.1M 
[ ]RpoB_WT_1.fastq.lines2025-02-16 01:47 9  
[DIR]RpoB_WT_2.1x36mers.unique.GPS/2025-02-22 05:16 -  
[TXT]RpoB_WT_2.SE.a.5p.counts.minus.bigWig2025-02-17 04:13 4.6M 
[TXT]RpoB_WT_2.SE.a.5p.counts.plus.bigWig2025-02-17 04:13 4.6M 
[DIR]RpoB_WT_2.SE.a.GPS/2025-03-21 17:33 -  
[TXT]RpoB_WT_2.SE.a.bigWig2025-02-17 04:13 13M 
[TXT]RpoB_WT_2.SE.a.minus.bigWig2025-02-17 04:13 9.1M 
[TXT]RpoB_WT_2.SE.a.plus.bigWig2025-02-17 04:13 9.1M 
[ ]RpoB_WT_2.fastq.lines2025-02-16 01:47 9  
[DIR]RpoB_del_cra_1.1x36mers.unique.GPS/2025-02-22 05:06 -  
[TXT]RpoB_del_cra_1.SE.a.5p.counts.minus.bigWig2025-02-17 04:13 4.7M 
[TXT]RpoB_del_cra_1.SE.a.5p.counts.plus.bigWig2025-02-17 04:13 4.6M 
[DIR]RpoB_del_cra_1.SE.a.GPS/2025-03-21 17:33 -  
[TXT]RpoB_del_cra_1.SE.a.bigWig2025-02-17 04:13 13M 
[TXT]RpoB_del_cra_1.SE.a.minus.bigWig2025-02-17 04:13 9.2M 
[TXT]RpoB_del_cra_1.SE.a.plus.bigWig2025-02-17 04:13 9.2M 
[ ]RpoB_del_cra_1.fastq.lines2025-02-16 01:47 9  
[DIR]RpoB_del_cra_2.1x36mers.unique.GPS/2025-02-22 05:05 -  
[TXT]RpoB_del_cra_2.SE.a.5p.counts.minus.bigWig2025-02-17 04:13 4.1M 
[TXT]RpoB_del_cra_2.SE.a.5p.counts.plus.bigWig2025-02-17 04:13 4.1M 
[DIR]RpoB_del_cra_2.SE.a.GPS/2025-03-21 17:33 -  
[TXT]RpoB_del_cra_2.SE.a.bigWig2025-02-17 04:13 12M 
[TXT]RpoB_del_cra_2.SE.a.minus.bigWig2025-02-17 04:13 8.2M 
[TXT]RpoB_del_cra_2.SE.a.plus.bigWig2025-02-17 04:13 8.2M 
[ ]RpoB_del_cra_2.fastq.lines2025-02-16 01:47 9  
[DIR]RpoB_del_crp_1.1x36mers.unique.GPS/2025-02-22 05:14 -  
[TXT]RpoB_del_crp_1.SE.a.5p.counts.minus.bigWig2025-02-17 04:13 4.3M 
[TXT]RpoB_del_crp_1.SE.a.5p.counts.plus.bigWig2025-02-17 04:13 4.3M 
[DIR]RpoB_del_crp_1.SE.a.GPS/2025-03-21 17:33 -  
[TXT]RpoB_del_crp_1.SE.a.bigWig2025-02-17 04:13 13M 
[TXT]RpoB_del_crp_1.SE.a.minus.bigWig2025-02-17 04:13 8.7M 
[TXT]RpoB_del_crp_1.SE.a.plus.bigWig2025-02-17 04:13 8.7M 
[ ]RpoB_del_crp_1.fastq.lines2025-02-16 01:47 9  
[DIR]RpoB_del_crp_2.1x36mers.unique.GPS/2025-02-22 05:14 -  
[TXT]RpoB_del_crp_2.SE.a.5p.counts.minus.bigWig2025-02-17 04:13 4.5M 
[TXT]RpoB_del_crp_2.SE.a.5p.counts.plus.bigWig2025-02-17 04:13 4.5M 
[DIR]RpoB_del_crp_2.SE.a.GPS/2025-03-21 17:33 -  
[TXT]RpoB_del_crp_2.SE.a.bigWig2025-02-17 04:13 13M 
[TXT]RpoB_del_crp_2.SE.a.minus.bigWig2025-02-17 04:13 9.0M 
[TXT]RpoB_del_crp_2.SE.a.plus.bigWig2025-02-17 04:13 9.0M 
[ ]RpoB_del_crp_2.fastq.lines2025-02-16 01:47 9  
[ ]SAMstats-1x36mers.files2025-02-15 07:09 560  
[TXT]SAMstats-1x36mers.sh2025-02-15 07:09 4.1K 
[ ]SAMstats-1x36mers.table2025-02-17 04:06 764  
[ ]SAMstats-2x36mers.files2025-02-15 07:09 560  
[ ]SAMstats-files.tar.gz2025-02-17 14:24 693  
[ ]config2025-02-15 07:09 4.1K 
[TXT]countlines.sh2025-02-15 07:09 764  
[TXT]make5pwiggle-1x36mers.sh2025-02-15 07:09 7.7K 
[TXT]makewiggle-1x36mers.sh2025-02-15 07:09 3.5K 
[TXT]makewiggle-stranded-1x36mers.sh2025-02-15 07:09 7.5K 
[TXT]map-1x36mers.sh2025-02-16 03:07 18K 
[TXT]run_spp.sh2025-02-15 07:09 1.6K 
[TXT]samtools-index-1x36mers.sh2025-02-15 07:09 2.5K 
[TXT]wget.sh2025-02-15 07:08 1.2K 
[TXT]wigtobigwig-wig-1x36mers.sh2025-02-15 07:09 3.3K 
[TXT]wigtobigwig-wigplusminus-1x36mers.sh2025-02-15 07:09 6.9K 
[TXT]wigtobigwig-wigplusminus5p-1x36mers.sh2025-02-15 07:09 7.4K 
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