Index of /kundaje/marinovg/oak/various/2013-10-22-Arabidopsis

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
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[DIR]01-organelles-only/2017-09-21 14:02 -  
[DIR]01/2025-08-29 16:30 -  
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[DIR]52-Zea_mays-organelles-nucleus-merged-k3m2/2017-09-21 14:55 -  
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[DIR]53-Oryza_sativa-organelles-nucleus-merged-k3m2/2017-09-21 14:56 -  
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[DIR]60-Zea_mays-organelles-nucleus-merged-k3m2/2017-09-21 15:23 -  
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[ ]Arabidopsis.MM0.chloroplast.files2013-10-29 17:42 12K 
[ ]Arabidopsis.MM0.chrM.files2013-10-29 17:42 11K 
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[TXT]Arabidopsis_thaliana.TAIR10.19.fixed.chloroplast.gff3.CDS2013-11-03 04:37 8.7K 
[TXT]Arabidopsis_thaliana.TAIR10.19.fixed.chloroplast.gff3.exon2013-11-03 04:37 17K 
[TXT]Arabidopsis_thaliana.TAIR10.19.fixed.chloroplast.gff3.protein_coding_gene2013-11-03 04:37 238K 
[TXT]Arabidopsis_thaliana.TAIR10.19.fixed.chloroplast.gff3.protein_coding_gene.minus.tile2013-11-03 04:44 1.8K 
[TXT]Arabidopsis_thaliana.TAIR10.19.fixed.chloroplast.gff3.protein_coding_gene.plus.tile2013-11-03 04:45 1.0K 
[TXT]Arabidopsis_thaliana.TAIR10.19.fixed.chloroplast.gff3.rRNA2013-11-03 04:37 848  
[TXT]Arabidopsis_thaliana.TAIR10.19.fixed.chloroplast.gff3.rRNA.minus.tiles2013-11-03 04:47 104  
[TXT]Arabidopsis_thaliana.TAIR10.19.fixed.chloroplast.gff3.rRNA.plus.tiles2013-11-03 04:47 104  
[TXT]Arabidopsis_thaliana.TAIR10.19.fixed.chloroplast.gff3.rRNA_gene2013-11-03 04:37 1.8K 
[TXT]Arabidopsis_thaliana.TAIR10.19.fixed.chloroplast.gff3.repeat.tiles2013-11-03 04:46 23K 
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[TXT]Arabidopsis_thaliana.TAIR10.19.fixed.chloroplast.gff3.tRNA_gene2013-11-03 04:37 6.2K 
[TXT]Arabidopsis_thaliana.TAIR10.19.fixed.chloroplast.gff3.tRNA_gene.minus.tiles2013-11-03 04:55 521  
[TXT]Arabidopsis_thaliana.TAIR10.19.fixed.chloroplast.gff3.tRNA_gene.plus.tiles2013-11-03 04:55 561  
[TXT]Arabidopsis_thaliana.TAIR10.19.fixed.chloroplast.gff3.transcript2013-11-03 04:37 14K 
[TXT]Arabidopsis_thaliana.TAIR10.19.fixed.chrM.gff32013-11-03 04:35 150K 
[TXT]Arabidopsis_thaliana.TAIR10.19.fixed.chrM.gff3.CDS2013-11-03 04:37 11K 
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[TXT]Arabidopsis_thaliana.TAIR10.19.fixed.chrM.gff3.protein_coding_gene2013-11-03 04:37 24K 
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[TXT]Arabidopsis_thaliana.TAIR10.19.fixed.chrM.gff3.rRNA.minus.tiles2013-11-03 04:54 54  
[TXT]Arabidopsis_thaliana.TAIR10.19.fixed.chrM.gff3.rRNA_gene2013-11-03 04:37 792  
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[TXT]Arabidopsis_thaliana.TAIR10.19.fixed.chrM.gff3.tRNA_gene2013-11-03 04:37 3.6K 
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[TXT]Arabidopsis_thaliana.TAIR10.19.fixed.chrM.gff3.tRNA_gene.plus.tiles2013-11-03 04:56 332  
[TXT]Arabidopsis_thaliana.TAIR10.19.fixed.chrM.gff3.transcript2013-11-03 04:37 16K 
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[TXT]GEMtoBed.sh2013-12-21 21:28 33K 
[ ]Gamma-Z-score-0.8-Arabidopsis-chloroplast.MM0.MaxZScores2013-10-29 17:58 12K 
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[ ]Gamma-Z-score-0.8-Arabidopsis-chrM.MM0.ZScores.table2013-10-29 17:47 3.1M 
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[ ]Oryza_sativa.chloroplast.ideogram.conf2013-11-04 02:51 337  
[ ]Oryza_sativa.chloroplast.ideogram.label.conf2013-11-04 02:46 169  
[ ]Oryza_sativa.chloroplast.ideogram.position.conf2013-11-04 02:46 143  
[ ]Oryza_sativa.chloroplast.karyotype2013-11-04 02:51 27  
[ ]Oryza_sativa.chloroplast.mappability-vs-chrM+chrP.conf2013-12-22 19:59 3.0K 
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[ ]Oryza_sativa.chloroplast.mappability-vs-chrP.conf2013-12-22 19:59 3.0K 
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[ ]Oryza_sativa.chloroplast.mappability.conf2013-12-22 19:58 3.0K 
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[ ]Oryza_sativa.chloroplast.ticks.conf2013-11-04 02:46 582  
[ ]Oryza_sativa.chrM.bands.conf2013-11-04 02:46 138  
[ ]Oryza_sativa.chrM.bed2013-11-04 02:53 13  
[ ]Oryza_sativa.chrM.housekeeping.conf2013-11-04 02:46 5.2K 
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[ ]Oryza_sativa.chrM.ideogram.label.conf2013-11-04 02:46 169  
[ ]Oryza_sativa.chrM.ideogram.position.conf2013-11-04 02:46 143  
[ ]Oryza_sativa.chrM.karyotype2013-11-04 02:54 27  
[ ]Oryza_sativa.chrM.mappability-vs-chrM+chrP.conf2013-12-22 19:59 2.7K 
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[ ]Oryza_sativa.chrM.ticks.conf2013-11-04 02:46 582  
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[TXT]Zea_mays.AGPv3.19.fixed.chloroplast.gff32014-04-15 07:35 50K 
[TXT]Zea_mays.AGPv3.19.fixed.chloroplast.gff3.CDS2014-04-15 07:35 5.9K 
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[TXT]Zea_mays.AGPv3.19.fixed.chloroplast.gff3.repeat.tiles2014-04-15 08:29 2.0K 
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[TXT]Zea_mays.AGPv3.19.fixed.chloroplast.gff3.transcript2014-04-15 07:35 9.5K 
[TXT]Zea_mays.AGPv3.19.fixed.chrM.gff32014-04-15 07:35 138K 
[TXT]Zea_mays.AGPv3.19.fixed.chrM.gff3.CDS2014-04-15 07:35 18K 
[TXT]Zea_mays.AGPv3.19.fixed.chrM.gff3.exon2014-04-15 07:35 26K 
[TXT]Zea_mays.AGPv3.19.fixed.chrM.gff3.gene2014-04-15 07:35 749  
[TXT]Zea_mays.AGPv3.19.fixed.chrM.gff3.protein_coding_gene2014-04-15 07:35 33K 
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[ ]max-signal-chloroplast-8-organelles-nucleus-merged-CHROMOMETHYLASE3_ChIPseq-GSM9561282013-12-21 21:21 31  
[ ]max-signal-chloroplast-12-organelles-nucleus-merged-APETALA3-GFP-AP1-GR-ap1-cal-ChIPseq-GSM9405862013-12-21 21:20 29  
[ ]max-signal-chloroplast-12-organelles-nucleus-merged-PISTILLATA-GFP-AP1-GR-ap1-cal-ChIPseq-GSM9405852013-12-23 11:39 29  
[ ]max-signal-chloroplast-16-organelles-nucleus-merged-TOC1_ChIPSeq-GSM8780682013-12-21 21:19 29  
[ ]max-signal-chrM-1-organelles-nucleus-merged-gFLM-GFP-replicate-2-DP28-GSM11675492013-12-21 21:19 23  
[ ]max-signal-chrM-8-organelles-nucleus-merged-CHROMOMETHYLASE3_ChIPseq-GSM9561282013-12-21 21:21 22  
[ ]max-signal-chrM-12-organelles-nucleus-merged-APETALA3-GFP-AP1-GR-ap1-cal-ChIPseq-GSM9405862013-12-21 21:20 22  
[ ]max-signal-chrM-12-organelles-nucleus-merged-PISTILLATA-GFP-AP1-GR-ap1-cal-ChIPseq-GSM9405852013-12-23 11:39 22  
[ ]max-signal-chrM-16-organelles-nucleus-merged-TOC1_ChIPSeq-GSM8780682013-12-21 21:19 22  
[DIR]meme-1-organelles-nucleus-merged-gFLM-GFP-replicate-2-DP28-GSM1167549.36mers.unique-gem.v2.2_GEM_events/2017-09-21 15:46 -  
[DIR]meme-8-organelles-nucleus-merged-CHROMOMETHYLASE3_ChIPseq-GSM956128.36mers.macs2.0.9_peaks.top500/2017-09-21 15:46 -  
[DIR]meme-12-organelles-nucleus-merged-APETALA3-GFP-AP1-GR-ap1-cal-ChIPseq-GSM940586.36mers.macs2.0.9_peaks.top500/2017-09-21 15:46 -  
[DIR]meme-12-organelles-nucleus-merged-PISTILLATA-GFP-AP1-GR-ap1-cal-ChIPseq-GSM940585.36mers.macs2.0.9_peaks.top500/2017-09-21 15:46 -  
[DIR]meme-16-organelles-nucleus-merged-TOC1_ChIPSeq-GSM878068.36mers.macs2.0.9_peaks/2017-09-21 15:46 -  
[DIR]motifs/2017-09-21 15:46 -  
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[ ]organelles-nucleus-merged-MACS-2.0.9.encodePeak.chrM-chloroplast2013-12-21 18:13 435K 
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