python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 10/NRPE1-ChIP-drd1-mutant-GSM958796.36mers.unique-gem.v2.2_GEM_events.txt 100 10/NRPE1-ChIP-drd1-mutant-GSM958796.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 10/NRPE1-ChIP-GSM958793.36mers.unique-gem.v2.2_GEM_events.txt 100 10/NRPE1-ChIP-GSM958793.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 10/NRPE1-ChIP-rdm1-mutant-GSM958798.36mers.unique-gem.v2.2_GEM_events.txt 100 10/NRPE1-ChIP-rdm1-mutant-GSM958798.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 10/NRPE1-ChIP-replicate-2-GSM958795.36mers.unique-gem.v2.2_GEM_events.txt 100 10/NRPE1-ChIP-replicate-2-GSM958795.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 10-organelles-nucleus-merged/NRPE1-ChIP-drd1-mutant-GSM958796.36mers.unique-gem.v2.2_GEM_events.txt 100 10-organelles-nucleus-merged/NRPE1-ChIP-drd1-mutant-GSM958796.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 10-organelles-nucleus-merged/NRPE1-ChIP-GSM958793.36mers.unique-gem.v2.2_GEM_events.txt 100 10-organelles-nucleus-merged/NRPE1-ChIP-GSM958793.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 10-organelles-nucleus-merged/NRPE1-ChIP-rdm1-mutant-GSM958798.36mers.unique-gem.v2.2_GEM_events.txt 100 10-organelles-nucleus-merged/NRPE1-ChIP-rdm1-mutant-GSM958798.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 10-organelles-nucleus-merged/NRPE1-ChIP-replicate-2-GSM958795.36mers.unique-gem.v2.2_GEM_events.txt 100 10-organelles-nucleus-merged/NRPE1-ChIP-replicate-2-GSM958795.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 11-organelles-nucleus-merged/PIF4-ChIP-Seq-GSM865709.36mers.unique-gem.v2.2_GEM_events.txt 100 11-organelles-nucleus-merged/PIF4-ChIP-Seq-GSM865709.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 11/PIF4-ChIP-Seq-GSM865709.36mers.unique-gem.v2.2_GEM_events.txt 100 11/PIF4-ChIP-Seq-GSM865709.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 12/APETALA3-GFP-AP1-GR-ap1-cal-ChIPseq-GSM940586.36mers.unique-gem.v2.2_GEM_events.txt 100 12/APETALA3-GFP-AP1-GR-ap1-cal-ChIPseq-GSM940586.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 12-organelles-nucleus-merged/APETALA3-GFP-AP1-GR-ap1-cal-ChIPseq-GSM940586.36mers.unique-gem.v2.2_GEM_events.txt 100 12-organelles-nucleus-merged/APETALA3-GFP-AP1-GR-ap1-cal-ChIPseq-GSM940586.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 12-organelles-nucleus-merged/PISTILLATA-GFP-AP1-GR-ap1-cal-ChIPseq-GSM940585.36mers.unique-gem.v2.2_GEM_events.txt 100 12-organelles-nucleus-merged/PISTILLATA-GFP-AP1-GR-ap1-cal-ChIPseq-GSM940585.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 12/PISTILLATA-GFP-AP1-GR-ap1-cal-ChIPseq-GSM940585.36mers.unique-gem.v2.2_GEM_events.txt 100 12/PISTILLATA-GFP-AP1-GR-ap1-cal-ChIPseq-GSM940585.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 13-organelles-nucleus-merged/REVOLUTA-GSM657970.36mers.unique-gem.v2.2_GEM_events.txt 100 13-organelles-nucleus-merged/REVOLUTA-GSM657970.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 14/H3.1-dividing-rep1-GSM897702.36mers.unique-gem.v2.2_GEM_events.txt 100 14/H3.1-dividing-rep1-GSM897702.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 14/H3.1-dividing-rep2-GSM897703.36mers.unique-gem.v2.2_GEM_events.txt 100 14/H3.1-dividing-rep2-GSM897703.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 14/H3.1-non-dividing-rep1-GSM897710.36mers.unique-gem.v2.2_GEM_events.txt 100 14/H3.1-non-dividing-rep1-GSM897710.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 14/H3.1-non-dividing-rep2-GSM897713.36mers.unique-gem.v2.2_GEM_events.txt 100 14/H3.1-non-dividing-rep2-GSM897713.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 14/H3.3-dividing-rep1-GSM897700.36mers.unique-gem.v2.2_GEM_events.txt 100 14/H3.3-dividing-rep1-GSM897700.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 14/H3.3-dividing-rep2-GSM897701.36mers.unique-gem.v2.2_GEM_events.txt 100 14/H3.3-dividing-rep2-GSM897701.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 14/H3.3-non-dividing-rep1-GSM897708.36mers.unique-gem.v2.2_GEM_events.txt 100 14/H3.3-non-dividing-rep1-GSM897708.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 14/H3.3-non-dividing-rep2-GSM897709.36mers.unique-gem.v2.2_GEM_events.txt 100 14/H3.3-non-dividing-rep2-GSM897709.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 14/H3-dividing-rep1-GSM897704.36mers.unique-gem.v2.2_GEM_events.txt 100 14/H3-dividing-rep1-GSM897704.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 14/H3-dividing-rep2-GSM897705.36mers.unique-gem.v2.2_GEM_events.txt 100 14/H3-dividing-rep2-GSM897705.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 14/H3-non-dividing-rep1-GSM897714.36mers.unique-gem.v2.2_GEM_events.txt 100 14/H3-non-dividing-rep1-GSM897714.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 14/H3-non-dividing-rep2-GSM897717.36mers.unique-gem.v2.2_GEM_events.txt 100 14/H3-non-dividing-rep2-GSM897717.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 14-organelles-nucleus-merged/H3.1-dividing-rep1-GSM897702.36mers.unique-gem.v2.2_GEM_events.txt 100 14-organelles-nucleus-merged/H3.1-dividing-rep1-GSM897702.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 14-organelles-nucleus-merged/H3.1-dividing-rep2-GSM897703.36mers.unique-gem.v2.2_GEM_events.txt 100 14-organelles-nucleus-merged/H3.1-dividing-rep2-GSM897703.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 14-organelles-nucleus-merged/H3.1-non-dividing-rep1-GSM897710.36mers.unique-gem.v2.2_GEM_events.txt 100 14-organelles-nucleus-merged/H3.1-non-dividing-rep1-GSM897710.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 14-organelles-nucleus-merged/H3.1-non-dividing-rep2-GSM897713.36mers.unique-gem.v2.2_GEM_events.txt 100 14-organelles-nucleus-merged/H3.1-non-dividing-rep2-GSM897713.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 14-organelles-nucleus-merged/H3.3-dividing-rep1-GSM897700.36mers.unique-gem.v2.2_GEM_events.txt 100 14-organelles-nucleus-merged/H3.3-dividing-rep1-GSM897700.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 14-organelles-nucleus-merged/H3.3-dividing-rep2-GSM897701.36mers.unique-gem.v2.2_GEM_events.txt 100 14-organelles-nucleus-merged/H3.3-dividing-rep2-GSM897701.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 14-organelles-nucleus-merged/H3.3-non-dividing-rep1-GSM897708.36mers.unique-gem.v2.2_GEM_events.txt 100 14-organelles-nucleus-merged/H3.3-non-dividing-rep1-GSM897708.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 14-organelles-nucleus-merged/H3.3-non-dividing-rep2-GSM897709.36mers.unique-gem.v2.2_GEM_events.txt 100 14-organelles-nucleus-merged/H3.3-non-dividing-rep2-GSM897709.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 14-organelles-nucleus-merged/H3-dividing-rep1-GSM897704.36mers.unique-gem.v2.2_GEM_events.txt 100 14-organelles-nucleus-merged/H3-dividing-rep1-GSM897704.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 14-organelles-nucleus-merged/H3-dividing-rep2-GSM897705.36mers.unique-gem.v2.2_GEM_events.txt 100 14-organelles-nucleus-merged/H3-dividing-rep2-GSM897705.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 14-organelles-nucleus-merged/H3-non-dividing-rep1-GSM897714.36mers.unique-gem.v2.2_GEM_events.txt 100 14-organelles-nucleus-merged/H3-non-dividing-rep1-GSM897714.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 14-organelles-nucleus-merged/H3-non-dividing-rep2-GSM897717.36mers.unique-gem.v2.2_GEM_events.txt 100 14-organelles-nucleus-merged/H3-non-dividing-rep2-GSM897717.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 15-organelles-nucleus-merged/PIF5ox-shade-ChIPSeq-GSM861508.36mers.unique-gem.v2.2_GEM_events.txt 100 15-organelles-nucleus-merged/PIF5ox-shade-ChIPSeq-GSM861508.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 15/PIF5ox-shade-ChIPSeq-GSM861508.36mers.unique-gem.v2.2_GEM_events.txt 100 15/PIF5ox-shade-ChIPSeq-GSM861508.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 16-organelles-nucleus-merged/TOC1_ChIPSeq-GSM878068.36mers.unique-gem.v2.2_GEM_events.txt 100 16-organelles-nucleus-merged/TOC1_ChIPSeq-GSM878068.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 17/HTR13-Myc-ChIP-seq-GSM856055.36mers.unique-gem.v2.2_GEM_events.txt 100 17/HTR13-Myc-ChIP-seq-GSM856055.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 17/HTR5-Myc-ChIP-seq-GSM856054.36mers.unique-gem.v2.2_GEM_events.txt 100 17/HTR5-Myc-ChIP-seq-GSM856054.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 18/FHY3-Dark-GSM761689.36mers.unique-gem.v2.2_GEM_events.txt 100 18/FHY3-Dark-GSM761689.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 18/FHY3-Far-Red-GSM761690.36mers.unique-gem.v2.2_GEM_events.txt 100 18/FHY3-Far-Red-GSM761690.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 18-organelles-nucleus-merged/FHY3-Dark-GSM761689.36mers.unique-gem.v2.2_GEM_events.txt 100 18-organelles-nucleus-merged/FHY3-Dark-GSM761689.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 18-organelles-nucleus-merged/FHY3-Far-Red-GSM761690.36mers.unique-gem.v2.2_GEM_events.txt 100 18-organelles-nucleus-merged/FHY3-Far-Red-GSM761690.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 18-organelles-only/FHY3-Far-Red-GSM761690.36mers.unique-gem.v2.2_GEM_events.txt 100 18-organelles-only/FHY3-Far-Red-GSM761690.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 19/LEAFY-samp-rep1-GSM605656.36mers.unique-gem.v2.2_GEM_events.txt 100 19/LEAFY-samp-rep1-GSM605656.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 19/LEAFY-samp-rep2-GSM605657.36mers.unique-gem.v2.2_GEM_events.txt 100 19/LEAFY-samp-rep2-GSM605657.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 19-organelles-nucleus-merged/LEAFY-samp-rep1-GSM605656.36mers.unique-gem.v2.2_GEM_events.txt 100 19-organelles-nucleus-merged/LEAFY-samp-rep1-GSM605656.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 19-organelles-nucleus-merged/LEAFY-samp-rep2-GSM605657.36mers.unique-gem.v2.2_GEM_events.txt 100 19-organelles-nucleus-merged/LEAFY-samp-rep2-GSM605657.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 1/DP103-1-FLMbeta-GFP-GSM1167541.36mers.unique-gem.v2.2_GEM_events.txt 100 1/DP103-1-FLMbeta-GFP-GSM1167541.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 1/DP103-3-FLMbeta-GFP-GSM1167547.36mers.unique-gem.v2.2_GEM_events.txt 100 1/DP103-3-FLMbeta-GFP-GSM1167547.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 1/DP104-4-FLMdelta-GFP-GSM1167544.36mers.unique-gem.v2.2_GEM_events.txt 100 1/DP104-4-FLMdelta-GFP-GSM1167544.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 1/gFLM-GFP-replicate-1-DP28-GSM1167551.36mers.unique-gem.v2.2_GEM_events.txt 100 1/gFLM-GFP-replicate-1-DP28-GSM1167551.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 1/gFLM-GFP-replicate-2-DP28-GSM1167549.36mers.unique-gem.v2.2_GEM_events.txt 100 1/gFLM-GFP-replicate-2-DP28-GSM1167549.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 1/gFLM-GFP-replicate-3-DP28-GSM1167552.36mers.unique-gem.v2.2_GEM_events.txt 100 1/gFLM-GFP-replicate-3-DP28-GSM1167552.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 1-organelles-nucleus-merged/DP103-1-FLMbeta-GFP-GSM1167541.36mers.unique-gem.v2.2_GEM_events.txt 100 1-organelles-nucleus-merged/DP103-1-FLMbeta-GFP-GSM1167541.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 1-organelles-nucleus-merged/DP103-3-FLMbeta-GFP-GSM1167547.36mers.unique-gem.v2.2_GEM_events.txt 100 1-organelles-nucleus-merged/DP103-3-FLMbeta-GFP-GSM1167547.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 1-organelles-nucleus-merged/DP104-4-FLMdelta-GFP-GSM1167544.36mers.unique-gem.v2.2_GEM_events.txt 100 1-organelles-nucleus-merged/DP104-4-FLMdelta-GFP-GSM1167544.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 1-organelles-nucleus-merged/gFLM-GFP-replicate-1-DP28-GSM1167551.36mers.unique-gem.v2.2_GEM_events.txt 100 1-organelles-nucleus-merged/gFLM-GFP-replicate-1-DP28-GSM1167551.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 1-organelles-nucleus-merged/gFLM-GFP-replicate-2-DP28-GSM1167549.36mers.unique-gem.v2.2_GEM_events.txt 100 1-organelles-nucleus-merged/gFLM-GFP-replicate-2-DP28-GSM1167549.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 1-organelles-nucleus-merged/gFLM-GFP-replicate-3-DP28-GSM1167552.36mers.unique-gem.v2.2_GEM_events.txt 100 1-organelles-nucleus-merged/gFLM-GFP-replicate-3-DP28-GSM1167552.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 20/H3_ChIPseq-GSM554341.36mers.unique-gem.v2.2_GEM_events.txt 100 20/H3_ChIPseq-GSM554341.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 20/H3K4me3_ChIPSeq-GSM554340.36mers.unique-gem.v2.2_GEM_events.txt 100 20/H3K4me3_ChIPSeq-GSM554340.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 20/H3K9ac_ChIPseq-GSM554339.36mers.unique-gem.v2.2_GEM_events.txt 100 20/H3K9ac_ChIPseq-GSM554339.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 20-organelles-nucleus-merged/H3_ChIPseq-GSM554341.36mers.unique-gem.v2.2_GEM_events.txt 100 20-organelles-nucleus-merged/H3_ChIPseq-GSM554341.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 20-organelles-nucleus-merged/H3K4me3_ChIPSeq-GSM554340.36mers.unique-gem.v2.2_GEM_events.txt 100 20-organelles-nucleus-merged/H3K4me3_ChIPSeq-GSM554340.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 20-organelles-nucleus-merged/H3K9ac_ChIPseq-GSM554339.36mers.unique-gem.v2.2_GEM_events.txt 100 20-organelles-nucleus-merged/H3K9ac_ChIPseq-GSM554339.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 20-organelles-only/H3_ChIPseq-GSM554341.36mers.unique-gem.v2.2_GEM_events.txt 100 20-organelles-only/H3_ChIPseq-GSM554341.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 21/AMS_ChIPSeq-GSM424618.36mers.unique-gem.v2.2_GEM_events.txt 100 21/AMS_ChIPSeq-GSM424618.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 21-organelles-nucleus-merged/AMS_ChIPSeq-GSM424618.36mers.unique-gem.v2.2_GEM_events.txt 100 21-organelles-nucleus-merged/AMS_ChIPSeq-GSM424618.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 22/APETALA2-chip_rep1-GSM532325.36mers.unique-gem.v2.2_GEM_events.txt 100 22/APETALA2-chip_rep1-GSM532325.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 22/APETALA2-chip_rep2-GSM532326.36mers.unique-gem.v2.2_GEM_events.txt 100 22/APETALA2-chip_rep2-GSM532326.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 22-organelles-nucleus-merged/APETALA2-chip_rep1-GSM532325.36mers.unique-gem.v2.2_GEM_events.txt 100 22-organelles-nucleus-merged/APETALA2-chip_rep1-GSM532325.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 22-organelles-nucleus-merged/APETALA2-chip_rep2-GSM532326.36mers.unique-gem.v2.2_GEM_events.txt 100 22-organelles-nucleus-merged/APETALA2-chip_rep2-GSM532326.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 23/APETALA1-GR_2h_induced_sample_1-GSM506208.36mers.unique-gem.v2.2_GEM_events.txt 100 23/APETALA1-GR_2h_induced_sample_1-GSM506208.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 23/APETALA1-GR_2h_induced_sample_2-GSM506209.36mers.unique-gem.v2.2_GEM_events.txt 100 23/APETALA1-GR_2h_induced_sample_2-GSM506209.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 23-organelles-nucleus-merged/APETALA1-GR_2h_induced_sample_1-GSM506208.36mers.unique-gem.v2.2_GEM_events.txt 100 23-organelles-nucleus-merged/APETALA1-GR_2h_induced_sample_1-GSM506208.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 23-organelles-nucleus-merged/APETALA1-GR_2h_induced_sample_2-GSM506209.36mers.unique-gem.v2.2_GEM_events.txt 100 23-organelles-nucleus-merged/APETALA1-GR_2h_induced_sample_2-GSM506209.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 24-organelles-nucleus-merged/SEPALLATA3-ChIPSeq_ag_3-GSM364943.36mers.unique-gem.v2.2_GEM_events.txt 100 24-organelles-nucleus-merged/SEPALLATA3-ChIPSeq_ag_3-GSM364943.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 24-organelles-nucleus-merged/SEPALLATA3-ChIPSeq_sep3_3-GSM364941.36mers.unique-gem.v2.2_GEM_events.txt 100 24-organelles-nucleus-merged/SEPALLATA3-ChIPSeq_sep3_3-GSM364941.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 24-organelles-nucleus-merged/SEPALLATA3-ChIPSeq_wt_2-GSM364940.36mers.unique-gem.v2.2_GEM_events.txt 100 24-organelles-nucleus-merged/SEPALLATA3-ChIPSeq_wt_2-GSM364940.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 24-organelles-nucleus-merged/SEPALLATA3-ChIPSeq_wt_3-GSM364942.36mers.unique-gem.v2.2_GEM_events.txt 100 24-organelles-nucleus-merged/SEPALLATA3-ChIPSeq_wt_3-GSM364942.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 24/SEPALLATA3-ChIPSeq_ag_3-GSM364943.36mers.unique-gem.v2.2_GEM_events.txt 100 24/SEPALLATA3-ChIPSeq_ag_3-GSM364943.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 24/SEPALLATA3-ChIPSeq_sep3_3-GSM364941.36mers.unique-gem.v2.2_GEM_events.txt 100 24/SEPALLATA3-ChIPSeq_sep3_3-GSM364941.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 24/SEPALLATA3-ChIPSeq_wt_2-GSM364940.36mers.unique-gem.v2.2_GEM_events.txt 100 24/SEPALLATA3-ChIPSeq_wt_2-GSM364940.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 24/SEPALLATA3-ChIPSeq_wt_3-GSM364942.36mers.unique-gem.v2.2_GEM_events.txt 100 24/SEPALLATA3-ChIPSeq_wt_3-GSM364942.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 25-organelles-nucleus-merged/KAN1-FLAG-replicate-2-GSM1167539.36mers.unique-gem.v2.2_GEM_events.txt 100 25-organelles-nucleus-merged/KAN1-FLAG-replicate-2-GSM1167539.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 2/AGAMOUS-GFP-AP1-GR-ap1-cal-Rep1-GSM1120014.36mers.unique-gem.v2.2_GEM_events.txt 100 2/AGAMOUS-GFP-AP1-GR-ap1-cal-Rep1-GSM1120014.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 2/AGAMOUS-GFP-AP1-GR-ap1-cal-Rep2-GSM1120015.36mers.unique-gem.v2.2_GEM_events.txt 100 2/AGAMOUS-GFP-AP1-GR-ap1-cal-Rep2-GSM1120015.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 2-organelles-nucleus-merged/AGAMOUS-GFP-AP1-GR-ap1-cal-Rep1-GSM1120014.36mers.unique-gem.v2.2_GEM_events.txt 100 2-organelles-nucleus-merged/AGAMOUS-GFP-AP1-GR-ap1-cal-Rep1-GSM1120014.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 2-organelles-nucleus-merged/AGAMOUS-GFP-AP1-GR-ap1-cal-Rep2-GSM1120015.36mers.unique-gem.v2.2_GEM_events.txt 100 2-organelles-nucleus-merged/AGAMOUS-GFP-AP1-GR-ap1-cal-Rep2-GSM1120015.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 3/NRPD1-Columbia-ChIP-GSM1103230.36mers.unique-gem.v2.2_GEM_events.txt 100 3/NRPD1-Columbia-ChIP-GSM1103230.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 3/NRPD1-Columbia-ChIP-replicate-2-GSM1103232.36mers.unique-gem.v2.2_GEM_events.txt 100 3/NRPD1-Columbia-ChIP-replicate-2-GSM1103232.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 3/NRPD1-shh1-PolIV-ChIP-replicate-2-GSM1103234.36mers.unique-gem.v2.2_GEM_events.txt 100 3/NRPD1-shh1-PolIV-ChIP-replicate-2-GSM1103234.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 3-organelles-nucleus-merged/NRPD1-Columbia-ChIP-GSM1103230.36mers.unique-gem.v2.2_GEM_events.txt 100 3-organelles-nucleus-merged/NRPD1-Columbia-ChIP-GSM1103230.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 3-organelles-nucleus-merged/NRPD1-Columbia-ChIP-replicate-2-GSM1103232.36mers.unique-gem.v2.2_GEM_events.txt 100 3-organelles-nucleus-merged/NRPD1-Columbia-ChIP-replicate-2-GSM1103232.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 3-organelles-nucleus-merged/NRPD1-shh1-PolIV-ChIP-replicate-2-GSM1103234.36mers.unique-gem.v2.2_GEM_events.txt 100 3-organelles-nucleus-merged/NRPD1-shh1-PolIV-ChIP-replicate-2-GSM1103234.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 3-organelles-nucleus-merged/PolIV-ChIP-GSM1103231.36mers.unique-gem.v2.2_GEM_events.txt 100 3-organelles-nucleus-merged/PolIV-ChIP-GSM1103231.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 3-organelles-nucleus-merged/PolIV-ChIP-replicate-2-GSM1103233.36mers.unique-gem.v2.2_GEM_events.txt 100 3-organelles-nucleus-merged/PolIV-ChIP-replicate-2-GSM1103233.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 3-organelles-only/NRPD1-Columbia-ChIP-replicate-2-GSM1103232.36mers.unique-gem.v2.2_GEM_events.txt 100 3-organelles-only/NRPD1-Columbia-ChIP-replicate-2-GSM1103232.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 3-organelles-only/NRPD1-shh1-PolIV-ChIP-replicate-2-GSM1103234.36mers.unique-gem.v2.2_GEM_events.txt 100 3-organelles-only/NRPD1-shh1-PolIV-ChIP-replicate-2-GSM1103234.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 3-organelles-only/PolIV-ChIP-replicate-2-GSM1103233.36mers.unique-gem.v2.2_GEM_events.txt 100 3-organelles-only/PolIV-ChIP-replicate-2-GSM1103233.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 3/PolIV-ChIP-GSM1103231.36mers.unique-gem.v2.2_GEM_events.txt 100 3/PolIV-ChIP-GSM1103231.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 3/PolIV-ChIP-replicate-2-GSM1103233.36mers.unique-gem.v2.2_GEM_events.txt 100 3/PolIV-ChIP-replicate-2-GSM1103233.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 4-organelles-nucleus-merged/SHORT_VEGETATIVE_PHASE-seedling_svp_SVP-GFP_rep1-GSM820413.unique-gem.v2.2_GEM_events.txt 100 4-organelles-nucleus-merged/SHORT_VEGETATIVE_PHASE-seedling_svp_SVP-GFP_rep1-GSM820413.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 5/gSOC1-GFP-replicate-1-GSM1116506.unique-gem.v2.2_GEM_events.txt 100 5/gSOC1-GFP-replicate-1-GSM1116506.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 5/gSOC1-GFP-replicate-2-GSM1116508.unique-gem.v2.2_GEM_events.txt 100 5/gSOC1-GFP-replicate-2-GSM1116508.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 5/gSOC1-GFP-replicate-3-GSM1116510.unique-gem.v2.2_GEM_events.txt 100 5/gSOC1-GFP-replicate-3-GSM1116510.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 5-organelles-nucleus-merged/gSOC1-GFP-replicate-1-GSM1116506.unique-gem.v2.2_GEM_events.txt 100 5-organelles-nucleus-merged/gSOC1-GFP-replicate-1-GSM1116506.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 5-organelles-nucleus-merged/gSOC1-GFP-replicate-2-GSM1116508.unique-gem.v2.2_GEM_events.txt 100 5-organelles-nucleus-merged/gSOC1-GFP-replicate-2-GSM1116508.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 5-organelles-nucleus-merged/gSOC1-GFP-replicate-3-GSM1116510.unique-gem.v2.2_GEM_events.txt 100 5-organelles-nucleus-merged/gSOC1-GFP-replicate-3-GSM1116510.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 5-organelles-only/gSOC1-GFP-replicate-3-GSM1116510.unique-gem.v2.2_GEM_events.txt 100 5-organelles-only/gSOC1-GFP-replicate-3-GSM1116510.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 6-organelles-nucleus-merged/PIF3-P3M-ChIP-1-GSM958269.unique-gem.v2.2_GEM_events.txt 100 6-organelles-nucleus-merged/PIF3-P3M-ChIP-1-GSM958269.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 6-organelles-nucleus-merged/PIF3-P3M-ChIP-2-GSM958270.unique-gem.v2.2_GEM_events.txt 100 6-organelles-nucleus-merged/PIF3-P3M-ChIP-2-GSM958270.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 6-organelles-nucleus-merged/PIF3-P3M-ChIP-3-GSM958271.unique-gem.v2.2_GEM_events.txt 100 6-organelles-nucleus-merged/PIF3-P3M-ChIP-3-GSM958271.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 6-organelles-nucleus-merged/PIF3-P3M-ChIP-4-GSM958272.unique-gem.v2.2_GEM_events.txt 100 6-organelles-nucleus-merged/PIF3-P3M-ChIP-4-GSM958272.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 6/PIF3-P3M-ChIP-1-GSM958269.unique-gem.v2.2_GEM_events.txt 100 6/PIF3-P3M-ChIP-1-GSM958269.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 6/PIF3-P3M-ChIP-2-GSM958270.unique-gem.v2.2_GEM_events.txt 100 6/PIF3-P3M-ChIP-2-GSM958270.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 6/PIF3-P3M-ChIP-3-GSM958271.unique-gem.v2.2_GEM_events.txt 100 6/PIF3-P3M-ChIP-3-GSM958271.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 6/PIF3-P3M-ChIP-4-GSM958272.unique-gem.v2.2_GEM_events.txt 100 6/PIF3-P3M-ChIP-4-GSM958272.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 7/nrpe1-Mnase-GSM941538.36mers.unique-gem.v2.2_GEM_events.txt 100 7/nrpe1-Mnase-GSM941538.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 7-organelles-nucleus-merged/nrpe1-Mnase-GSM941538.36mers.unique-gem.v2.2_GEM_events.txt 100 7-organelles-nucleus-merged/nrpe1-Mnase-GSM941538.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 9/AGO4-ChIP-GSM867184.36mers.unique-gem.v2.2_GEM_events.txt 100 9/AGO4-ChIP-GSM867184.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 9/nrpe1_AGO4_ChIP-GSM867186.36mers.unique-gem.v2.2_GEM_events.txt 100 9/nrpe1_AGO4_ChIP-GSM867186.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 9-organelles-nucleus-merged/AGO4-ChIP-GSM867184.36mers.unique-gem.v2.2_GEM_events.txt 100 9-organelles-nucleus-merged/AGO4-ChIP-GSM867184.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 9-organelles-nucleus-merged/nrpe1_AGO4_ChIP-GSM867186.36mers.unique-gem.v2.2_GEM_events.txt 100 9-organelles-nucleus-merged/nrpe1_AGO4_ChIP-GSM867186.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 9-organelles-nucleus-merged/WT_AGO4-ChIP-GSM867182.36mers.unique-gem.v2.2_GEM_events.txt 100 9-organelles-nucleus-merged/WT_AGO4-ChIP-GSM867182.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr
python /woldlab/castor/data00/home/georgi/code/ChIP/GEM-output-to-BED.py 9/WT_AGO4-ChIP-GSM867182.36mers.unique-gem.v2.2_GEM_events.txt 100 9/WT_AGO4-ChIP-GSM867182.36mers.unique-gem.v2.2_GEM_events.100bp.bed -addChr