# Parameters
data_name = "Vdr"
task_idxs = "0-213,216-278"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
overwrite = False

from matlas.reports import collect_motifDB_to_be_displayed, display_comparative_cell_types

load data from labcluster

Using TensorFlow backend.
2019-08-23 11:47:33,085 [WARNING] git-lfs not installed

homer_matches, modisco_matches = collect_motifDB_to_be_displayed(task_idxs, homer_root, modisco_root, 
                                                              overwrite=False)

TF-MoDISco is using the TensorFlow backend.

display_comparative_cell_types(data_name, homer_matches, modisco_matches)

Vdr: Motif: M09315_2.00

Forward PWM

Reverse PWM

No Cell types that both TF-MoDISco and Homer finds Vdr

Unique Cell types only TF-MoDISco finds Vdr: #13

Cell type	Modisco	Homer
wES;5th_Rhmbmr;E8.5;A;GEO	Pattern: metacluster_0/pattern_5 Significance: 0.046952	Absent
npES;5th_Rhmbmr_delA;E8.5;A;GEO	Pattern: metacluster_0/pattern_14 Significance: 0.0378903	Absent
wES;posterior;1;E9.5;A;GEO	Pattern: metacluster_1/pattern_12 Significance: 0.0414784	Absent
wES;posterior;1;E8.5;A;GEO	Pattern: metacluster_0/pattern_21 Significance: 0.00894623	Absent
npES;posterior_delA;E8.5;A;GEO	Pattern: metacluster_0/pattern_13 Significance: 0.0230249	Absent
npES;posterior_delC;E8.5;A;GEO	Pattern: metacluster_0/pattern_24 Significance: 0.0374793	Absent
immatureB;A;CL	Pattern: metacluster_1/pattern_6 Significance: 0.0597913	Absent
wES;GRM;E16.5;A;GEO	Pattern: metacluster_0/pattern_26 Significance: 0.0124796	Absent
npES;3rd_Rhmbmr_delA;E8.5;A;GEO	Pattern: metacluster_0/pattern_15 Significance: 0.0194509	Absent
wES;3rd_Rhmbmr;E8.5;A;GEO	Pattern: metacluster_0/pattern_14 Significance: 0.051988099999999995	Absent
npES;3rd_Rhmbmr_delC;E8.5;A;GEO	Pattern: metacluster_0/pattern_13 Significance: 0.0282837	Absent
npES;5th_Rhmbmr_delC;E8.5;A;GEO	Pattern: metacluster_1/pattern_8 Significance: 0.0339773	Absent
wES;5th_Rhmbmr;E9.5;A;GEO	Pattern: metacluster_0/pattern_10 Significance: 0.0129572	Absent

Unique Cell types only Homer finds Vdr: #1

Cell type	Modisco	Homer
wES;posterior;2;E9.5;A;GEO	Absent	Pattern: motif9.motif Significance: 0.0333923