# Parameters
data_name = "immatureB;A;CL"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
tomtom_report_root = "http://mitra.stanford.edu/kundaje/msharmin/report/tomtom_outs/cells"
task_dir = "task_7-naivegw"
perf_file = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/fineFactorized/task_7-naivegw/NaiveauPRC.txt"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
reportfile = "/mnt/lab_data/kundaje/msharmin/annotations/filtering samples_MS2.xlsx"
sheetname = "filter23"

from matlas.reports import display_metadata

load data from labcluster

Using TensorFlow backend.
2019-08-30 18:41:46,685 [WARNING] git-lfs not installed

display_metadata(data_name, perf_file, reportfile, sheetname)

Sample Information

MetaData Name	Description
Cell type	immature B cells
Cell Group	B cells
Experiment Name	ATAC
Experiment Group	Casellas Lab

Pipeline Output

replicate	Naïve overlap peaks	IDR peaks	TSS enrichment (< 8 is very poor <10 is low)	Final number of unique mapping, dup-filtered, chrM filtered reads	Number of reads in called peak regions	Fraction of reads in called peak regions	Number of reads in promoter regions	Fraction of reads in promoter regions	Number of reads in enhancer regions	Fraction of reads in enhancer regions
rep1	108031	85381	12.7455	49661326	8628773	0.1738	5843008	0.1177	15431841	0.3109

Modelling Metadata

Metric	Value
auPRC	0.5535
Calibrated Recall at 50% FDR	0.257
Number of Positive Examples in Test Data	92124
Number of Negative Examples in Test Data	7978727
Imbalance Ratio in Test Data	0.0114
Test Chromosomes	chr2, chr3, chr19

from matlas.reports import display_paiwise_pattern_comparison
from matlas.reports import display_denovo_patterns

display_denovo_patterns(data_name, modisco_root=modisco_root)

TF-MoDISco is using the TensorFlow backend.

The following two links show list of Denovo Patterns and corresponding Motifs discovered by TF-MoDISco

Click here for Denovo Patterns by TF-MoDISco: #20

Pattern Name	TF Name(s)	Modisco
metacluster_1/pattern_0 # seqlets: 8162 SequenceContrib ScoresHyp_Contrib Scores	Spib, Spi1, Etv2, Irf4, Irf8, Ets1, Spic, Etv4, Erg, Etv6, Fli1, Ehf, Etv3, Elk1, XP_911724.4, Gabpa, Elf3, Elf1, Elk4, Elf4, Elk3, Elf2, Etv1, Etv5, Elf5, Prdm1, Irf3, Irf2, Fev, Irf1, Spdef
metacluster_1/pattern_1 # seqlets: 5738 SequenceContrib ScoresHyp_Contrib Scores	Ctcf, Ctcfl
metacluster_1/pattern_2 # seqlets: 2547 SequenceContrib ScoresHyp_Contrib Scores	Stat2, Irf7, Stat1, Zscan10, Irf9
metacluster_1/pattern_3 # seqlets: 2252 SequenceContrib ScoresHyp_Contrib Scores	Sp4, Sp2, Sp3, Klf3, Sp1, Klf6, E2f4, Klf7, Klf4, Klf8, Klf1, Klf12, Egr1, Zbtb17, Egr2, E2f1, Klf5, Sp5, Zfp281, Zfx, Zfp740, Zbtb1, Egr3
metacluster_1/pattern_4 # seqlets: 1456 SequenceContrib ScoresHyp_Contrib Scores	Nfyb, Nfyc, Nfya, Foxi1, Pbx3
metacluster_1/pattern_5 # seqlets: 1266 SequenceContrib ScoresHyp_Contrib Scores	Nrf1
metacluster_1/pattern_6 # seqlets: 833 SequenceContrib ScoresHyp_Contrib Scores	Creb1, Usf2, Atf2, Atf7, Atf1, Crem, Jdp2, Creb5, Usf1, Atf3, Tfe3, Tfec, Fosl2, Srebf1, Bhlhe40, Rfx1, Mitf, Tfeb, Rxrb, Srebf2, Vdr
metacluster_1/pattern_7 # seqlets: 830 SequenceContrib ScoresHyp_Contrib Scores	Zfp143, Thap11, Tbx2
metacluster_1/pattern_8 # seqlets: 640 SequenceContrib ScoresHyp_Contrib Scores	Taf1, Yy1, Zfp42, Mxi1, Wt1, Maz
metacluster_1/pattern_9 # seqlets: 415 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_10 # seqlets: 409 SequenceContrib ScoresHyp_Contrib Scores	Rfx3, Rfx2, Rfx4, Rfx7, Rfx6
metacluster_1/pattern_11 # seqlets: 336 SequenceContrib ScoresHyp_Contrib Scores	Pou2f2
metacluster_1/pattern_12 # seqlets: 311 SequenceContrib ScoresHyp_Contrib Scores	Nfkb2, Nfkb1, Rela, Relb
metacluster_1/pattern_13 # seqlets: 227 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_14 # seqlets: 177 SequenceContrib ScoresHyp_Contrib Scores	Ebf1, Prdm16
metacluster_1/pattern_15 # seqlets: 167 SequenceContrib ScoresHyp_Contrib Scores	Zbtb33
metacluster_1/pattern_16 # seqlets: 96 SequenceContrib ScoresHyp_Contrib Scores	Klf15, Sall4
metacluster_1/pattern_17 # seqlets: 89 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_18 # seqlets: 55 SequenceContrib ScoresHyp_Contrib Scores	Nfia, Nfib, Nfic
metacluster_1/pattern_19 # seqlets: 42 SequenceContrib ScoresHyp_Contrib Scores	Mef2d, Mef2a, Mef2c

Click here for Motifs by TF-MoDISco: #118

TF Name	Pattern(s)
Spib	Pattern Name Modisco Significance metacluster_1/pattern_0 1.32929e-05 metacluster_1/pattern_2 7.96853e-07
Spi1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.000786067 metacluster_1/pattern_2 0.00714339 metacluster_1/pattern_9 0.00998118
Etv2	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00014596799999999998
Irf4	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00014596799999999998 metacluster_1/pattern_2 0.0166445
Irf8	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00014596799999999998 metacluster_1/pattern_2 3.3794199999999998e-12
Ets1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.000786067 metacluster_1/pattern_16 0.0466999
Spic	Pattern Name Modisco Significance metacluster_1/pattern_0 0.000871189 metacluster_1/pattern_9 0.00217918
Etv4	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00230277 metacluster_1/pattern_16 0.0270712
Erg	Pattern Name Modisco Significance metacluster_1/pattern_0 0.000786067
Etv6	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00163415
Fli1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00436888 metacluster_1/pattern_16 0.0179285
Ehf	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00455616
Etv3	Pattern Name Modisco Significance metacluster_1/pattern_0 0.000786067
Elk1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00203262 metacluster_1/pattern_16 0.049261599999999996
XP_911724.4	Pattern Name Modisco Significance metacluster_1/pattern_0 0.000786067
Gabpa	Pattern Name Modisco Significance metacluster_1/pattern_0 0.0165993 metacluster_1/pattern_16 0.0466999
Elf3	Pattern Name Modisco Significance metacluster_1/pattern_0 0.010346
Elf1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.000811546
Elk4	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00185359
Elf4	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00126581
Elk3	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00224139 metacluster_1/pattern_16 0.0191078
Elf2	Pattern Name Modisco Significance metacluster_1/pattern_0 0.013318200000000002 metacluster_1/pattern_13 0.0203634
Etv1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.002777 metacluster_1/pattern_16 0.0199584
Etv5	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00230277 metacluster_1/pattern_16 0.014551
Elf5	Pattern Name Modisco Significance metacluster_1/pattern_0 0.013498500000000002
Prdm1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00442574 metacluster_1/pattern_2 0.00473273
Irf3	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00615343 metacluster_1/pattern_2 0.00148087
Irf2	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00702103 metacluster_1/pattern_2 0.015957299999999997
Fev	Pattern Name Modisco Significance metacluster_1/pattern_0 0.010346 metacluster_1/pattern_16 0.036320599999999995
Irf1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.010444799999999999 metacluster_1/pattern_2 3.0454400000000004e-06
Spdef	Pattern Name Modisco Significance metacluster_1/pattern_0 0.0165993
Ctcf	Pattern Name Modisco Significance metacluster_1/pattern_1 2.53907e-14
Ctcfl	Pattern Name Modisco Significance metacluster_1/pattern_1 1.34273e-07
Stat2	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00291631
Irf7	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00291631
Stat1	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00354198
Zscan10	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00820657
Irf9	Pattern Name Modisco Significance metacluster_1/pattern_2 0.0149388
Sp4	Pattern Name Modisco Significance metacluster_1/pattern_3 0.00164773 metacluster_1/pattern_16 0.0229227
Sp2	Pattern Name Modisco Significance metacluster_1/pattern_3 2.24664e-06 metacluster_1/pattern_8 2.4652600000000002e-05 metacluster_1/pattern_15 0.00106673 metacluster_1/pattern_16 2.17631e-05
Sp3	Pattern Name Modisco Significance metacluster_1/pattern_3 9.01158e-06 metacluster_1/pattern_8 9.744459999999999e-05 metacluster_1/pattern_15 0.00952357 metacluster_1/pattern_16 0.000557926
Klf3	Pattern Name Modisco Significance metacluster_1/pattern_3 9.01158e-06 metacluster_1/pattern_8 0.0205019 metacluster_1/pattern_16 0.00118986
Sp1	Pattern Name Modisco Significance metacluster_1/pattern_3 0.00043883199999999995 metacluster_1/pattern_8 0.000115474 metacluster_1/pattern_15 0.00431716 metacluster_1/pattern_16 0.00118986
Klf6	Pattern Name Modisco Significance metacluster_1/pattern_3 0.00043883199999999995 metacluster_1/pattern_16 0.00813734
E2f4	Pattern Name Modisco Significance metacluster_1/pattern_3 0.00043883199999999995 metacluster_1/pattern_16 0.000557926
Klf7	Pattern Name Modisco Significance metacluster_1/pattern_3 0.00045424800000000003 metacluster_1/pattern_16 0.0400841
Klf4	Pattern Name Modisco Significance metacluster_1/pattern_3 0.0103705 metacluster_1/pattern_16 0.0195201
Klf8	Pattern Name Modisco Significance metacluster_1/pattern_3 0.00074296
Klf1	Pattern Name Modisco Significance metacluster_1/pattern_3 0.037165199999999995
Klf12	Pattern Name Modisco Significance metacluster_1/pattern_3 0.0112216
Egr1	Pattern Name Modisco Significance metacluster_1/pattern_3 0.037165199999999995 metacluster_1/pattern_16 0.012137299999999998
Zbtb17	Pattern Name Modisco Significance metacluster_1/pattern_3 0.00721017 metacluster_1/pattern_8 0.0205019 metacluster_1/pattern_16 0.0011007
Egr2	Pattern Name Modisco Significance metacluster_1/pattern_3 0.038969699999999996 metacluster_1/pattern_8 0.0485631
E2f1	Pattern Name Modisco Significance metacluster_1/pattern_3 0.0122176 metacluster_1/pattern_16 0.0194707
Klf5	Pattern Name Modisco Significance metacluster_1/pattern_3 0.017897999999999997 metacluster_1/pattern_16 0.00748562
Sp5	Pattern Name Modisco Significance metacluster_1/pattern_3 0.024393400000000003 metacluster_1/pattern_16 0.00171458
Zfp281	Pattern Name Modisco Significance metacluster_1/pattern_3 0.028604900000000003 metacluster_1/pattern_16 0.021443200000000003
Zfx	Pattern Name Modisco Significance metacluster_1/pattern_3 0.037165199999999995 metacluster_1/pattern_6 0.030021499999999996 metacluster_1/pattern_8 0.0017507999999999998 metacluster_1/pattern_15 0.00677411 metacluster_1/pattern_16 0.00610428
Zfp740	Pattern Name Modisco Significance metacluster_1/pattern_3 0.037165199999999995
Zbtb1	Pattern Name Modisco Significance metacluster_1/pattern_3 0.0558078
Egr3	Pattern Name Modisco Significance metacluster_1/pattern_3 0.0558078
Nfyb	Pattern Name Modisco Significance metacluster_1/pattern_4 1.7123199999999999e-13
Nfyc	Pattern Name Modisco Significance metacluster_1/pattern_4 9.82919e-12
Nfya	Pattern Name Modisco Significance metacluster_1/pattern_4 3.27064e-11
Foxi1	Pattern Name Modisco Significance metacluster_1/pattern_4 5.22808e-07
Pbx3	Pattern Name Modisco Significance metacluster_1/pattern_4 5.619680000000001e-06
Nrf1	Pattern Name Modisco Significance metacluster_1/pattern_5 9.76298e-07
Creb1	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0049394
Usf2	Pattern Name Modisco Significance metacluster_1/pattern_6 5.71604e-06 metacluster_1/pattern_8 0.0485631
Atf2	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00551451
Atf7	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00261545
Atf1	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0354084
Crem	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0437664
Jdp2	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0049394
Creb5	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00497713
Usf1	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00950181
Atf3	Pattern Name Modisco Significance metacluster_1/pattern_6 0.030021499999999996
Tfe3	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0116108
Tfec	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0209186
Fosl2	Pattern Name Modisco Significance metacluster_1/pattern_6 0.030021499999999996
Srebf1	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0382201
Bhlhe40	Pattern Name Modisco Significance metacluster_1/pattern_6 0.047652099999999996
Rfx1	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0354084 metacluster_1/pattern_8 0.00371634 metacluster_1/pattern_10 3.33177e-11
Mitf	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0437664
Tfeb	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0459935
Rxrb	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0459935
Srebf2	Pattern Name Modisco Significance metacluster_1/pattern_6 0.048813800000000004
Vdr	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0597913
Zfp143	Pattern Name Modisco Significance metacluster_1/pattern_7 3.17998e-22
Thap11	Pattern Name Modisco Significance metacluster_1/pattern_7 5.37404e-22
Tbx2	Pattern Name Modisco Significance metacluster_1/pattern_7 2.27169e-13
Taf1	Pattern Name Modisco Significance metacluster_1/pattern_8 1.0548800000000001e-05
Yy1	Pattern Name Modisco Significance metacluster_1/pattern_8 1.16549e-05
Zfp42	Pattern Name Modisco Significance metacluster_1/pattern_8 0.0118007
Mxi1	Pattern Name Modisco Significance metacluster_1/pattern_8 0.028727600000000002 metacluster_1/pattern_16 0.0466999
Wt1	Pattern Name Modisco Significance metacluster_1/pattern_8 0.031032900000000002 metacluster_1/pattern_16 0.0011007
Maz	Pattern Name Modisco Significance metacluster_1/pattern_8 0.0549602 metacluster_1/pattern_16 0.0011007
Rfx3	Pattern Name Modisco Significance metacluster_1/pattern_10 0.00066708
Rfx2	Pattern Name Modisco Significance metacluster_1/pattern_10 0.020868400000000002
Rfx4	Pattern Name Modisco Significance metacluster_1/pattern_10 6.90431e-05
Rfx7	Pattern Name Modisco Significance metacluster_1/pattern_10 0.000494756
Rfx6	Pattern Name Modisco Significance metacluster_1/pattern_10 0.00127971
Pou2f2	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00686678
Nfkb2	Pattern Name Modisco Significance metacluster_1/pattern_12 1.68878e-05
Nfkb1	Pattern Name Modisco Significance metacluster_1/pattern_12 0.000798048
Rela	Pattern Name Modisco Significance metacluster_1/pattern_12 0.00374941
Relb	Pattern Name Modisco Significance metacluster_1/pattern_12 0.00139441
Ebf1	Pattern Name Modisco Significance metacluster_1/pattern_14 0.00110143
Prdm16	Pattern Name Modisco Significance metacluster_1/pattern_14 0.0199847
Zbtb33	Pattern Name Modisco Significance metacluster_1/pattern_15 9.445269999999999e-06
Klf15	Pattern Name Modisco Significance metacluster_1/pattern_16 0.00683397
Sall4	Pattern Name Modisco Significance metacluster_1/pattern_16 0.026057099999999996
Nfia	Pattern Name Modisco Significance metacluster_1/pattern_18 0.000580067
Nfib	Pattern Name Modisco Significance metacluster_1/pattern_18 0.00136018
Nfic	Pattern Name Modisco Significance metacluster_1/pattern_18 0.0217315
Mef2d	Pattern Name Modisco Significance metacluster_1/pattern_19 2.35443e-06
Mef2a	Pattern Name Modisco Significance metacluster_1/pattern_19 0.000581955
Mef2c	Pattern Name Modisco Significance metacluster_1/pattern_19 0.000137265

display_paiwise_pattern_comparison(data_name, modisco_root, homer_root)

Number of CISBP TFs obtained by TF-MoDISco and Homer

Shared TFs between TF-MoDISco and Homer: #66

TF Name	Modisco	Homer
Klf1	Pattern Name Modisco Significance metacluster_1/pattern_3 0.037165199999999995	Pattern Name Homer Significance motif3.motif 0.03265440000000001
Gabpa	Pattern Name Modisco Significance metacluster_1/pattern_0 0.0165993 metacluster_1/pattern_16 0.0466999	Pattern Name Homer Significance motif2.motif 0.00462232
Irf1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.010444799999999999 metacluster_1/pattern_2 3.0454400000000004e-06	Pattern Name Homer Significance motif2.motif 0.00980133 motif8.motif 0.00146476
Klf4	Pattern Name Modisco Significance metacluster_1/pattern_3 0.0103705 metacluster_1/pattern_16 0.0195201	Pattern Name Homer Significance motif3.motif 0.0523452
Thap11	Pattern Name Modisco Significance metacluster_1/pattern_7 5.37404e-22	Pattern Name Homer Significance motif5.motif 1.97861e-06
Etv6	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00163415	Pattern Name Homer Significance motif2.motif 0.00147831
Taf1	Pattern Name Modisco Significance metacluster_1/pattern_8 1.0548800000000001e-05	Pattern Name Homer Significance motif14.motif 0.000649009
Etv2	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00014596799999999998	Pattern Name Homer Significance motif2.motif 0.000163756
Tbx2	Pattern Name Modisco Significance metacluster_1/pattern_7 2.27169e-13	Pattern Name Homer Significance motif5.motif 9.991649999999999e-05
Etv3	Pattern Name Modisco Significance metacluster_1/pattern_0 0.000786067	Pattern Name Homer Significance motif2.motif 0.00020574
Spic	Pattern Name Modisco Significance metacluster_1/pattern_0 0.000871189 metacluster_1/pattern_9 0.00217918	Pattern Name Homer Significance motif2.motif 0.0005298319999999999
Spdef	Pattern Name Modisco Significance metacluster_1/pattern_0 0.0165993	Pattern Name Homer Significance motif2.motif 0.0102367
Ctcfl	Pattern Name Modisco Significance metacluster_1/pattern_1 1.34273e-07	Pattern Name Homer Significance motif1.motif 0.00123079
Zbtb1	Pattern Name Modisco Significance metacluster_1/pattern_3 0.0558078	Pattern Name Homer Significance motif3.motif 0.0439842
Nrf1	Pattern Name Modisco Significance metacluster_1/pattern_5 9.76298e-07	Pattern Name Homer Significance motif11.motif 6.793819999999999e-07
Sp5	Pattern Name Modisco Significance metacluster_1/pattern_3 0.024393400000000003 metacluster_1/pattern_16 0.00171458	Pattern Name Homer Significance motif3.motif 0.0546425
E2f1	Pattern Name Modisco Significance metacluster_1/pattern_3 0.0122176 metacluster_1/pattern_16 0.0194707	Pattern Name Homer Significance motif3.motif 0.0566849
Nfya	Pattern Name Modisco Significance metacluster_1/pattern_4 3.27064e-11	Pattern Name Homer Significance motif7.motif 0.010556
Klf8	Pattern Name Modisco Significance metacluster_1/pattern_3 0.00074296	Pattern Name Homer Significance motif3.motif 0.00122684
Etv5	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00230277 metacluster_1/pattern_16 0.014551	Pattern Name Homer Significance motif2.motif 0.00059924
Pou2f2	Pattern Name Modisco Significance metacluster_1/pattern_11 0.00686678	Pattern Name Homer Significance motif17.motif 0.031211900000000004
Elk3	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00224139 metacluster_1/pattern_16 0.0191078	Pattern Name Homer Significance motif2.motif 0.000608589
Egr1	Pattern Name Modisco Significance metacluster_1/pattern_3 0.037165199999999995 metacluster_1/pattern_16 0.012137299999999998	Pattern Name Homer Significance motif3.motif 0.014104499999999999
Elf1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.000811546	Pattern Name Homer Significance motif2.motif 0.00019036299999999998
Spib	Pattern Name Modisco Significance metacluster_1/pattern_0 1.32929e-05 metacluster_1/pattern_2 7.96853e-07	Pattern Name Homer Significance motif2.motif 2.7962800000000003e-05 motif8.motif 0.013708199999999999
Fli1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00436888 metacluster_1/pattern_16 0.0179285	Pattern Name Homer Significance motif2.motif 0.0005298319999999999
Klf5	Pattern Name Modisco Significance metacluster_1/pattern_3 0.017897999999999997 metacluster_1/pattern_16 0.00748562	Pattern Name Homer Significance motif3.motif 0.017166499999999998
Erg	Pattern Name Modisco Significance metacluster_1/pattern_0 0.000786067	Pattern Name Homer Significance motif2.motif 0.00018993799999999998
Etv1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.002777 metacluster_1/pattern_16 0.0199584	Pattern Name Homer Significance motif2.motif 0.000640113
Ctcf	Pattern Name Modisco Significance metacluster_1/pattern_1 2.53907e-14	Pattern Name Homer Significance motif1.motif 0.0005702869999999999
Fev	Pattern Name Modisco Significance metacluster_1/pattern_0 0.010346 metacluster_1/pattern_16 0.036320599999999995	Pattern Name Homer Significance motif2.motif 0.0026254
Elf5	Pattern Name Modisco Significance metacluster_1/pattern_0 0.013498500000000002	Pattern Name Homer Significance motif2.motif 0.0132382
Zfp143	Pattern Name Modisco Significance metacluster_1/pattern_7 3.17998e-22	Pattern Name Homer Significance motif5.motif 6.303200000000001e-06
Elf4	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00126581	Pattern Name Homer Significance motif2.motif 0.000566717
Irf2	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00702103 metacluster_1/pattern_2 0.015957299999999997	Pattern Name Homer Significance motif2.motif 0.00657555 motif8.motif 0.00118888
Elk1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00203262 metacluster_1/pattern_16 0.049261599999999996	Pattern Name Homer Significance motif2.motif 0.000364621
Klf15	Pattern Name Modisco Significance metacluster_1/pattern_16 0.00683397	Pattern Name Homer Significance motif3.motif 0.0439842
Irf3	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00615343 metacluster_1/pattern_2 0.00148087	Pattern Name Homer Significance motif2.motif 0.00980133
Sp4	Pattern Name Modisco Significance metacluster_1/pattern_3 0.00164773 metacluster_1/pattern_16 0.0229227	Pattern Name Homer Significance motif3.motif 0.028898300000000002
Klf6	Pattern Name Modisco Significance metacluster_1/pattern_3 0.00043883199999999995 metacluster_1/pattern_16 0.00813734	Pattern Name Homer Significance motif3.motif 0.00321398
Sp2	Pattern Name Modisco Significance metacluster_1/pattern_3 2.24664e-06 metacluster_1/pattern_8 2.4652600000000002e-05 metacluster_1/pattern_15 0.00106673 metacluster_1/pattern_16 2.17631e-05	Pattern Name Homer Significance motif3.motif 4.93492e-06
Klf3	Pattern Name Modisco Significance metacluster_1/pattern_3 9.01158e-06 metacluster_1/pattern_8 0.0205019 metacluster_1/pattern_16 0.00118986	Pattern Name Homer Significance motif3.motif 0.000173047
Elf2	Pattern Name Modisco Significance metacluster_1/pattern_0 0.013318200000000002 metacluster_1/pattern_13 0.0203634	Pattern Name Homer Significance motif2.motif 0.015521700000000001
Zbtb33	Pattern Name Modisco Significance metacluster_1/pattern_15 9.445269999999999e-06	Pattern Name Homer Significance motif13.motif 0.0007495000000000001
Klf12	Pattern Name Modisco Significance metacluster_1/pattern_3 0.0112216	Pattern Name Homer Significance motif3.motif 0.028898300000000002
E2f4	Pattern Name Modisco Significance metacluster_1/pattern_3 0.00043883199999999995 metacluster_1/pattern_16 0.000557926	Pattern Name Homer Significance motif3.motif 0.00367473
Yy1	Pattern Name Modisco Significance metacluster_1/pattern_8 1.16549e-05	Pattern Name Homer Significance motif14.motif 0.00693937
Irf8	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00014596799999999998 metacluster_1/pattern_2 3.3794199999999998e-12	Pattern Name Homer Significance motif2.motif 0.000163756 motif8.motif 0.00114046
Elf3	Pattern Name Modisco Significance metacluster_1/pattern_0 0.010346	Pattern Name Homer Significance motif2.motif 0.00516536
Foxi1	Pattern Name Modisco Significance metacluster_1/pattern_4 5.22808e-07	Pattern Name Homer Significance motif7.motif 0.0309008
Ehf	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00455616	Pattern Name Homer Significance motif2.motif 0.00142734
Elk4	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00185359	Pattern Name Homer Significance motif2.motif 0.000325531
Spi1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.000786067 metacluster_1/pattern_2 0.00714339 metacluster_1/pattern_9 0.00998118	Pattern Name Homer Significance motif2.motif 0.00042251699999999997
Egr2	Pattern Name Modisco Significance metacluster_1/pattern_3 0.038969699999999996 metacluster_1/pattern_8 0.0485631	Pattern Name Homer Significance motif3.motif 0.0439842
Sp1	Pattern Name Modisco Significance metacluster_1/pattern_3 0.00043883199999999995 metacluster_1/pattern_8 0.000115474 metacluster_1/pattern_15 0.00431716 metacluster_1/pattern_16 0.00118986	Pattern Name Homer Significance motif3.motif 0.010522700000000001
Ets1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.000786067 metacluster_1/pattern_16 0.0466999	Pattern Name Homer Significance motif2.motif 0.000163756
XP_911724.4	Pattern Name Modisco Significance metacluster_1/pattern_0 0.000786067	Pattern Name Homer Significance motif2.motif 0.000325531
Zbtb17	Pattern Name Modisco Significance metacluster_1/pattern_3 0.00721017 metacluster_1/pattern_8 0.0205019 metacluster_1/pattern_16 0.0011007	Pattern Name Homer Significance motif3.motif 0.0205378
Nfyb	Pattern Name Modisco Significance metacluster_1/pattern_4 1.7123199999999999e-13	Pattern Name Homer Significance motif7.motif 0.0064697
Klf7	Pattern Name Modisco Significance metacluster_1/pattern_3 0.00045424800000000003 metacluster_1/pattern_16 0.0400841	Pattern Name Homer Significance motif3.motif 0.0007053560000000001
Sp3	Pattern Name Modisco Significance metacluster_1/pattern_3 9.01158e-06 metacluster_1/pattern_8 9.744459999999999e-05 metacluster_1/pattern_15 0.00952357 metacluster_1/pattern_16 0.000557926	Pattern Name Homer Significance motif3.motif 3.4258600000000003e-06
Irf7	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00291631	Pattern Name Homer Significance motif8.motif 0.0155891
Prdm1	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00442574 metacluster_1/pattern_2 0.00473273	Pattern Name Homer Significance motif2.motif 0.00516536 motif8.motif 0.00602311
Etv4	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00230277 metacluster_1/pattern_16 0.0270712	Pattern Name Homer Significance motif2.motif 0.000608589
Irf4	Pattern Name Modisco Significance metacluster_1/pattern_0 0.00014596799999999998 metacluster_1/pattern_2 0.0166445	Pattern Name Homer Significance motif2.motif 0.000163756 motif8.motif 0.015046799999999999
Nfyc	Pattern Name Modisco Significance metacluster_1/pattern_4 9.82919e-12	Pattern Name Homer Significance motif7.motif 0.010556

Unique TF-MoDISco TFs: #52

TF Name	Modisco	Homer
Srebf1	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0382201	Absent
Nfic	Pattern Name Modisco Significance metacluster_1/pattern_18 0.0217315	Absent
Srebf2	Pattern Name Modisco Significance metacluster_1/pattern_6 0.048813800000000004	Absent
Rfx7	Pattern Name Modisco Significance metacluster_1/pattern_10 0.000494756	Absent
Rfx1	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0354084 metacluster_1/pattern_8 0.00371634 metacluster_1/pattern_10 3.33177e-11	Absent
Relb	Pattern Name Modisco Significance metacluster_1/pattern_12 0.00139441	Absent
Pbx3	Pattern Name Modisco Significance metacluster_1/pattern_4 5.619680000000001e-06	Absent
Mitf	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0437664	Absent
Vdr	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0597913	Absent
Nfkb2	Pattern Name Modisco Significance metacluster_1/pattern_12 1.68878e-05	Absent
Sall4	Pattern Name Modisco Significance metacluster_1/pattern_16 0.026057099999999996	Absent
Creb5	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00497713	Absent
Zscan10	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00820657	Absent
Stat1	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00354198	Absent
Mef2a	Pattern Name Modisco Significance metacluster_1/pattern_19 0.000581955	Absent
Prdm16	Pattern Name Modisco Significance metacluster_1/pattern_14 0.0199847	Absent
Bhlhe40	Pattern Name Modisco Significance metacluster_1/pattern_6 0.047652099999999996	Absent
Tfeb	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0459935	Absent
Zfp740	Pattern Name Modisco Significance metacluster_1/pattern_3 0.037165199999999995	Absent
Crem	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0437664	Absent
Rxrb	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0459935	Absent
Mxi1	Pattern Name Modisco Significance metacluster_1/pattern_8 0.028727600000000002 metacluster_1/pattern_16 0.0466999	Absent
Rfx4	Pattern Name Modisco Significance metacluster_1/pattern_10 6.90431e-05	Absent
Zfp42	Pattern Name Modisco Significance metacluster_1/pattern_8 0.0118007	Absent
Maz	Pattern Name Modisco Significance metacluster_1/pattern_8 0.0549602 metacluster_1/pattern_16 0.0011007	Absent
Creb1	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0049394	Absent
Atf3	Pattern Name Modisco Significance metacluster_1/pattern_6 0.030021499999999996	Absent
Atf1	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0354084	Absent
Fosl2	Pattern Name Modisco Significance metacluster_1/pattern_6 0.030021499999999996	Absent
Zfx	Pattern Name Modisco Significance metacluster_1/pattern_3 0.037165199999999995 metacluster_1/pattern_6 0.030021499999999996 metacluster_1/pattern_8 0.0017507999999999998 metacluster_1/pattern_15 0.00677411 metacluster_1/pattern_16 0.00610428	Absent
Rfx2	Pattern Name Modisco Significance metacluster_1/pattern_10 0.020868400000000002	Absent
Usf2	Pattern Name Modisco Significance metacluster_1/pattern_6 5.71604e-06 metacluster_1/pattern_8 0.0485631	Absent
Jdp2	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0049394	Absent
Mef2d	Pattern Name Modisco Significance metacluster_1/pattern_19 2.35443e-06	Absent
Egr3	Pattern Name Modisco Significance metacluster_1/pattern_3 0.0558078	Absent
Tfe3	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0116108	Absent
Rela	Pattern Name Modisco Significance metacluster_1/pattern_12 0.00374941	Absent
Nfia	Pattern Name Modisco Significance metacluster_1/pattern_18 0.000580067	Absent
Stat2	Pattern Name Modisco Significance metacluster_1/pattern_2 0.00291631	Absent
Zfp281	Pattern Name Modisco Significance metacluster_1/pattern_3 0.028604900000000003 metacluster_1/pattern_16 0.021443200000000003	Absent
Irf9	Pattern Name Modisco Significance metacluster_1/pattern_2 0.0149388	Absent
Nfkb1	Pattern Name Modisco Significance metacluster_1/pattern_12 0.000798048	Absent
Rfx6	Pattern Name Modisco Significance metacluster_1/pattern_10 0.00127971	Absent
Nfib	Pattern Name Modisco Significance metacluster_1/pattern_18 0.00136018	Absent
Wt1	Pattern Name Modisco Significance metacluster_1/pattern_8 0.031032900000000002 metacluster_1/pattern_16 0.0011007	Absent
Atf7	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00261545	Absent
Rfx3	Pattern Name Modisco Significance metacluster_1/pattern_10 0.00066708	Absent
Tfec	Pattern Name Modisco Significance metacluster_1/pattern_6 0.0209186	Absent
Usf1	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00950181	Absent
Ebf1	Pattern Name Modisco Significance metacluster_1/pattern_14 0.00110143	Absent
Mef2c	Pattern Name Modisco Significance metacluster_1/pattern_19 0.000137265	Absent
Atf2	Pattern Name Modisco Significance metacluster_1/pattern_6 0.00551451	Absent

Unique Homer TFs: #2

TF Name	Modisco	Homer
E2f7	Absent	Pattern Name Homer Significance motif3.motif 0.0457524
Pou5f1	Absent	Pattern Name Homer Significance motif17.motif 0.048744499999999996